KEGG   Aegilops tauschii (wheat D): 109753399
Entry
109753399         CDS       T04345                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109753399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ats03041]
    109753399
   03036 Chromosome and associated proteins [BR:ats03036]
    109753399
Spliceosome [BR:ats03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109753399
 Complex B
    109753399
 Complex C
   U2 SnRNP specific factors
    109753399
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    109753399
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Cnd1 Adaptin_N Vac14_Fab1_bd UME
Other DBs
NCBI-GeneID: 109753399
NCBI-ProteinID: XP_040244629
LinkDB
Position
5:complement(26197898..26204305)
AA seq 1349 aa
MDGIDAELARAQEERQRLEEALAAGAPMAVSSVTFDKDLYGGGGGFAGYDTSIPASEDDD
DAPEDAPNPAARRLASYTGHAVAAAADIPRSADGGDDDGAPANKPRRIIDREDDYRRRRL
DRGLSPERHDAFAAGEATPAPSVRTYGDAMREASVLQEKERTLREIAKKKKEEEERAKEK
KAAPQPPSAALTKRRNRWDQSQEGDAAAAAGAEKKAKTDSDWDAPDATPGIGRWDATPGR
AGDATPSVRRNRWDETPTPGRMADGDATPAAGGITPGAGATPSGAWDATPKLLPGGLATP
TPKKQRSRWDETPVSMGNATPSGTAATPFGAENLATPTPGHLAAVQMTPEYYHLLRMERD
IEERNRPLTDEELDAMFPPQGYKILEPPASYQPICTPARKLLATPTPLSTPLYAIPEENR
GQQFDVPKDLGPGLPLMKPEDIQFFGKLLNEDDEEQLTPEEQKERKIMKLLLKVKNGTPP
QRKTSLRQLTDKAREFGAGPLFNGILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPF
VHKILVVIEPLLIDEDYYARAEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTAR
AFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKNLVEIM
EHGLTDENQKVRTITALSLAALAEAAAPYGIESFDSVLRPLWKGTRCHSGKVLAAFLKAI
GFIIPLMDAEYASFYTKGVMPVLIREFKSPDEEMKKIVLKVVKQCVSTEGVQADYIRSQC
VISTQCLDPDCIRSHRVLSAFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTDIVGKI
VEDLKDESEPYRRMVMETIEKVVANLGTSDIDPRLEELLIDGILYAFQEQTSDDANVMLN
GFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMG
HLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQ
ENCIDLVGRIADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQD
VLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLS
FLFEYIGEMGKDYIYAVAPLLEDALMDRDLVHRQTAASAIKHMALGVAGLGCEDALVHLL
NYVWPNIFETSPHLINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSL
YIGAQDALVASYPSLGDLGNNDIFSRPEGVLVQVCRRVLSGFGTGHCKGRVVCLLRRSVT
FHNPTLKAEENHRSYMYDVLVWLRSVKQY
NT seq 4050 nt   +upstreamnt  +downstreamnt
atggacgggatcgacgcggagctcgcgcgcgcgcaggaggagcgccagaggctggaggag
gccctggcggcgggcgcgcccatggccgtctcctccgtcaccttcgacaaggacctctac
ggcgggggcggcggcttcgccggctacgacacctccatcccggcctccgaggacgacgac
gacgcgcccgaggacgcccccaaccccgccgcgcgccgcctcgcctcctacacgggccac
gccgtcgccgcggccgccgacatcccccgctcggccgacggcggcgacgacgacggggcc
cccgccaacaagccccggcgcatcatcgaccgcgaggacgactaccgccggcgccgcctc
gaccgcggcctctcgcccgagcgccacgacgcgttcgccgcgggggaggcaaccccggcc
ccctccgtccggacctacggcgacgccatgcgcgaggccagcgtgctgcaagagaaggag
cgcacgctgcgggagatcgctaagaagaagaaggaggaggaggagagagccaaggagaag
aaggccgcgcctcagccaccgtcagccgcattgacaaaacggcgcaataggtgggatcag
tcgcaggagggtgatgctgcagctgctgctggggccgagaagaaggccaagacagactca
gattgggatgcccctgatgcaactcctggaattgggcgctgggacgccacccctgggcgt
gccggagacgcgacgccctctgtgaggaggaacaggtgggatgagactccgactccaggg
aggatggctgatggagatgcaactccggcagctggtggcattaccccaggagcaggagcc
accccttctggggcatgggatgctactcctaagctgctgcctggtgggcttgccacgcca
acgcccaagaagcagagatcgaggtgggatgagactccggttagtatggggaatgcaaca
cccagtggcacggcagcgacaccatttggagcagagaaccttgccacgccgacacctggc
caccttgctgctgtccagatgactccggagtattaccatctcctgcggatggagcgggac
attgaggagcgaaacaggcctctcactgacgaggagcttgacgccatgttcccgccgcag
ggatacaagattcttgaacctccagcatcgtaccagcccatatgcacacctgcaaggaag
ctgcttgctacaccaacgcctctgagcacaccattgtatgctattcccgaggagaatcgt
gggcagcaatttgatgtgcccaaggacttgggtcctgggttgccactcatgaagccagag
gatatacagttctttgggaagttgctgaatgaggatgacgaggagcagctgacgccagag
gagcagaaggagagaaaaatcatgaaactcctgctcaaggtgaagaacggcacgccccca
cagcgaaagacgtcacttcggcagctcacggacaaagcacgtgaatttggtgctggcccg
ctgttcaatggaatcctgccattgctcatgcagccaacgcttgaggaccaggagcggcat
ctcctggtgaaggttattgacagggtgctgtataagctggatgagctggtccgtccattt
gtgcacaagattcttgtagttatcgagccacttttgattgatgaggattactacgctcgt
gctgagggcagggagattatctcaaatcttagcaaagctgctggtcttgctactatgatt
gccgccatgagaccggatattgataacattgacgagtatgtgaggaatacaactgctagg
gcattcagtgtggtggcttctgctttgggtatccccgccctcctcccatttttgaaggct
gtttgtcagagtaagaagtcctggcaagctcgacacactggtatcaagattgttcagcag
attgctattctcatgggctgtgctgttctgcctcaccttaagaacctagttgagatcatg
gagcatggtctaactgatgagaaccagaaagtgcggacaatcactgctctctctcttgct
gcacttgctgaagctgctgcgccctatggtatagaaagttttgatagtgtgttgagacct
ctctggaagggtaccagatgtcacagtggaaaggtccttgctgccttcttgaaggctatt
ggtttcatcatccctcttatggatgctgagtatgccagtttctacacgaagggtgtgatg
ccagtcttaatcagagagttcaagtccccagatgaagagatgaagaagattgtcctgaag
gttgtgaagcagtgtgtcagtacagagggtgtacaggctgattatatccggagtcagtgt
gtcatcagcacacagtgtttagatcctgattgtatccggagtcacagagtcctttcagcg
ttcttcaaacacttctgggttaggagaatggctctagatcgtaggaactataagcaactt
gtggaaacaacagtagagatggcaaacaaggtgggagttactgatatcgtcgggaagatt
gttgaggatctgaaagatgaaagtgagccttacaggagaatggtgatggaaacaattgag
aaggtggtggctaacttgggtacctcggatattgatcctcgtctggaggagctgcttatt
gatggcatcctgtatgctttccaggagcagacaagtgatgatgcaaatgtcatgcttaat
ggctttggagctgttgtgaatgcgcttggccagagggtcaagccttaccttccgcagata
tgtggtaccatcaagtggcggttgaacaacaagagtgcaaaagttaggcagcaagctgct
gatctgatctcaaggatagctattgtgatgaagcagtgccaggaggaacagcttatgggt
cacctgggtgttgtgctatatgagtacttgggggaggagtatcctgaggtgctgggttca
attcttggagcgttgaaggctattgttaatgttattggcatgactaagatgacgcctcca
atcaaggatcttcttcctcgtttgacccccatcttgaaaaataggcatgagaaagtccaa
gagaactgcattgatctagttggtaggatagctgatcgcggagcagaatttgtaccagct
cgggagtggatgaggatttgttttgagctgctggaaatgttgaaggctcacaagaagggt
atcagaagagccactgtgaacacatttggttatattgccaaggcaatcgggcctcaggac
gtgttggccactctgttgaataacctgaaggtgcaggagcgacagaaccgtgtttgcacg
actgtagcaattgctattgttgctgaaacttgctcgccgttcacagttttgcctgccctc
atgaatgagtaccgggttccggagctcaatgtccagaatggtgttttgaaatctctctct
ttcctctttgagtatattggtgagatgggcaaagattacatatatgcagtcgctcccttg
cttgaagatgcactgatggacagggatctggttcacaggcagactgctgcgtctgctatc
aagcatatggctctaggagttgcaggcttgggttgtgaggatgctcttgtccatttgctc
aactatgtctggcccaacatatttgagacatctccccatctcataaatgccgtcatggaa
gctatcgaggggatgcgagttgctctaggcgcagccgtggttctgaattattgccttcaa
ggcctcttccatccagcaaggaaagtacgtgaagtatactggaagatctacaactcgctg
tatattggcgcacaggatgcacttgtggcttcttatccttccctaggcgatcttggaaac
aacgacatcttcagccgtccagagggtgttttggtccaagtgtgccgaagagtcttatct
ggatttgggaccgggcattgcaagggccgagtggtgtgtttacttcgtcgcagtgtaacc
tttcataatcctactttgaaggctgaagaaaatcataggtcttatatgtatgatgtacta
gtgtggttaaggagtgtgaagcaatattag

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