Aegilops tauschii (wheat D): 109754507
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Entry
109754507 CDS
T04345
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109754507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109754507
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109754507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Vps36-NZF-N
AAA_22
Motif
Other DBs
NCBI-GeneID:
109754507
NCBI-ProteinID:
XP_020168998
LinkDB
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Position
5D:272663900..272670872
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AA seq
726 aa
AA seq
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MFVPKTDNQSDLEGPHRNAGPWLCSICSQQNDTSCMSCEVCGVLRDLSLYFNNTNEPEGG
AKRRNKHSGVSVLARSLFTPSSPKSKAIVFSDGFRGNKNATGHMQASLGTLHKTFMTHKQ
RHNIVPFKFDIPSPDDMVSIGLKSSRHLRKDIPGKMVMGDDDLVAEKDTSTDPSSSVKLD
ELGGNSSSVAANTRNETLILDNELQHLSLERKPKNSKAKIKKPVPVSQYKPEPWMLQGED
QEMPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKNEKEAKEKGKGSFAYAWAMD
ESADERARGITMNVGVAYFDTKNYQVVMLDSPGHKDFVPNMISGVTQADAAVLVVDASLG
SFESGMGVNGVGQTKEHSQLIRSFGVENLIVAVNKMDSVEYSAERFNYVKSQLGIFLRSC
GYKESAITWVPLSAMENENLVTAASDTRLSSWFHGTCLLEAIDSSAAPHRDVSKPLRLPI
CDVISSHVLGQVAVCGKVVCGAIRSDSKVLVMPSGELATVKIIERDSSRLSSARAGDNIA
IGLQGIDPIHVMSGGVLCHPDYPVSVASSLELKILVLDITVPILPGLQFELHAHHAKVSA
SLVRIVSLLDQKTGKASARKPRMLTARQAAVVEVRLEREVCVEEFGTLKALGRAFLRSQG
STVAVGVVTRVVQVDMSTLRAPPSVPSGRPRPSRSSLICLPMSARPPIELLQLKLSSYRY
TSLRRA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtacctaaaacagataaccaatctgatctcgaggggccgcatagaaatgctggg
ccgtggctgtgctccatttgctcgcagcaaaatgatacgagttgtatgtcctgtgaggta
tgcggcgttcttcgggatttgtcgctgtatttcaataacaccaatgaacctgaaggtgga
gctaaacgcagaaacaagcattctggtgtgtctgtactggcaagatctcttttcacacca
tccagtccaaaatcaaaagccattgttttctccgatggatttcgaggcaacaaaaacgca
acaggacatatgcaagcttccttgggtaccctccacaaaacattcatgacacataagcag
cgccataacatagtgcctttcaagtttgatataccatctcctgatgacatggtctctata
ggcttaaaatcgtccagacatttgcgaaaagatatccccggaaagatggtgatgggtgat
gatgatcttgtagctgagaaggatacaagtacagacccaagttcatcagtgaagttggat
gaacttggtggaaatagtagcagtgttgccgccaatactcggaacgaaactcttattttg
gacaatgagctacaacatttgagtttagagaggaagccaaaaaacagtaaagccaagatt
aagaagccagttcctgtttcacagtacaagccagaaccgtggatgctacagggagaagat
caagaaatgcctaggcaactaaatcttgctattgttggtcacgttgattctggcaaatca
acattatgtggtcggttgctgcatgccctgggtagaatttcaaaaaagcaaatgcataag
aatgagaaagaagcgaaagaaaagggaaaagggtcgtttgcatatgcttgggccatggat
gagagtgctgacgaaagggcacgtggtatcacgatgaatgtcggtgtagcatactttgac
accaaaaactaccaagttgttatgctcgactcccctggtcacaaagatttcgttcctaac
atgatatctggagtgacacaagctgatgcagctgtcctagttgttgatgcctctctagga
tcatttgagtcgggtatgggcgttaatggggttggacagacaaaggagcactcacagctt
attcgaagtttcggtgttgagaacttgatagttgctgttaataagatggattcagtggaa
tattcggcggaacgcttcaattatgtgaaatcacaacttggcatttttctccgatcatgt
ggctataaagagtcagcgataacctgggttcctttgagtgcaatggaaaatgagaatctg
gtgacagcagcttcagatactcgtctctcatcatggtttcatgggacttgccttctggaa
gcaattgactcgtcagcagcacctcaccgtgatgtttcaaagccactacggcttccaatt
tgtgatgttatttcatcccatgtgctggggcaagtggcggtttgcggtaaagtagtgtgt
ggagcaatccgaagcgattccaaggttcttgtgatgccttctggagagctagctacagtg
aaaatcatcgagcgggactcctctcgtctcagctcggcaagagccggcgacaacattgcg
attgggctgcaagggatcgaccctatccatgtgatgtcgggtggagtcctgtgccatcca
gattaccccgtgtcggtggcgtcttccctggagctgaagatcctggtgctagacatcacc
gtacccatactgccgggccttcagtttgagctccacgcacaccacgcgaaggtgtcggcg
tccctggtgaggatcgtgtcgctgctggaccagaagaccggcaaggcctcggcgaggaag
ccgcggatgctgaccgcaaggcaggccgctgtcgtcgaggtgaggctggagagggaggtg
tgcgtggaggagtttggaacactcaaggccctcggccgcgcgttcctgcggtcgcagggg
agcaccgtggcggtcggcgtcgtgacccgcgtcgtgcaggtcgacatgtccacgttgcga
gctccaccttccgtcccgtccggccgtccccgtccgtcgaggtcgtcgttgatttgcttg
cccatgtcagcacgtccgccgatcgagctgcttcaactcaaactctcgagttatagatac
actagcctgcggcgcgcataa
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