Aegilops tauschii (wheat D): 109754767
Help
Entry
109754767 CDS
T04345
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109754767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109754767
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109754767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_12
TPR_19
TPR_9
TPR_7
ARM_TT21_C
BTAD
T7SS_EccA1_N
TPR_15
TPR_4
Motif
Other DBs
NCBI-GeneID:
109754767
NCBI-ProteinID:
XP_020169256
LinkDB
All DBs
Position
1:complement(308961509..308969798)
Genome browser
AA seq
1151 aa
AA seq
DB search
MSAPAAKQGAEEEAERLLAAAKLNPNDGGPFRSLGHHYARAGDAQRAARCFERAVALDPD
DAESGEALCDLLDAEGKESLELAVCKEAAGKSPRAFWAFRRLGYLQVHQKKWSDAIQSLQ
HSIRGYPTCADLWEALGLAYHRLGMFTAAVKSYGRAIELDSSRVFALIESGNIQLMLGYF
RKGVEQFRSAVEMAPHNHSAYFGLASALLAWSKHCVTIGAFTWAANLLKEASETAKVCTS
LAGNLSCVWKLHADTQLALARCFPWEDRHIKRGMDEQNFKASVLQWRNTCLSAANSAKLS
YQRALHLTPWEANIHIDTAICLDLICTMEENNSADPIVWELPEKMSLGGLMLEPVNKDFW
VTLGSVSSNQALKQHSLIRALQLDTSLSEAWAYLGKIYRQSGHKQLARQAFDRARSIDPS
LALPWAGMSAENDHQSRAGAVNESYESCLRAVQILPLPEFQIGLGTIAARSGELMSPQVL
MAVRQAVQRAPHYPESHNINGLVSEVRSDFQSAITSYQHAKFALGMMRRSKLDNRYPFVD
VSVNLARSLCKAGLATDAVRECEELKTQGLLNVDGLQVYALALWKLGRHDEALSISRNLA
ENLSNMKQESATGALGFICTLAYNIAGKDSAASVIHTLPGQPSYNRELKFIISALDALQP
SKRFQLPHLSTPPRLTSYDVMSEVHSNIALGKAIGGESNNCLGAEGGLSYLKKVLHMYPD
CSLVRNHLGSLLLSSGDWTASHKAVRVTSLSHGHTSNRGLRSPHQIQACATMSCYATCTS
YPKFSFPTCEDQYLSQYNGICNLQRLVHQEPWNQDARYLLVLAIFQKAREEKYPKHICAT
LKRLVLQIMSSSSNSQEHKLILYEKYLLLLLSSEVSLQSDDYENGIAQVTDALRVAPPSV
DTFFAHLQLCRAYVVQGDLSNSRKEYMKCLQNRTNTEVGWVTLKQLESLCLVNRGSDEIE
INLKECIERNGSFPSKWAALFNLACAQCFMRDEDFASAEKALAQACAEKDADSCILFLNG
AMHMEIARRYAAPQYITRAASSLRKAQQKSQAAVPIISLLLAQAEGSLGSKAKWEKNLRL
EWFSWPPELRPAELYFQMHLLASQSTAVGPQQKKLQLVETMQSPGAWLLRAIHQNPSCSR
YWKALLQLVCV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccccgcggcgaagcagggcgcggaggaggaggccgagcgcctcctcgcggcc
gccaagctgaaccccaacgacggcgggcccttccgctccctcggccaccactacgcccgc
gccggcgacgcgcagcgcgccgccaggtgcttcgagcgggccgtggcgctcgaccccgac
gacgccgagtccggggaggcgctctgcgatttgcttgacgcggaggggaaggagagcctg
gagctcgccgtgtgcaaggaggctgccggcaagtcaccgcgcgcgttttgggccttccgg
agactcggctacttgcaggttcatcaaaagaagtggtcagatgctatacagagccttcaa
cactcaatacgaggttacccaacatgtgcggatttatgggaggcacttggtctggcttac
caccgtttgggcatgtttactgctgcagtaaagtcatatgggcgagctattgaacttgat
agttcccgggtctttgctttgatcgaaagtggaaacatccagctaatgcttggctatttc
agaaagggagtcgaacagttccgttctgccgtggagatggctcctcataatcattctgca
tactttggacttgcctcggcattgcttgcgtggtcaaagcattgtgtaactattggggcc
tttacctgggcagctaatctgctgaaggaagcatcagaaactgctaaagtttgcacttcc
ttggctggaaacctttcctgtgtttggaaattgcatgcagatactcagctcgcacttgca
aggtgttttccgtgggaggataggcatattaagaggggcatggatgaacaaaatttcaaa
gcttccgtccttcagtggagaaatacatgtttgtcagctgcaaatagtgcaaaactctca
tatcaacgagctttgcacctcactccttgggaagctaatattcacattgatactgctatt
tgtcttgatctcatttgtaccatggaggagaataactctgcagatcccattgtttgggag
cttccagaaaaaatgtcattgggtggtttgatgctggaaccagttaataaggatttctgg
gttacattgggttcagtctcaagtaatcaggctttaaagcagcattctcttatcagggca
ctgcagttggatacgtctctctctgaagcttgggcataccttggaaagatttacagacaa
tcaggtcacaagcaattggcaagacaagcatttgatcgagctcgaagcattgatccatcg
ttggccttgccatgggctggaatgtcggcagaaaacgatcaccaatctagggctggtgca
gtaaacgagtcttatgaaagttgcttgagagctgtgcagatactacctctgccagagttc
cagattggccttggaacaattgcagctcgttccggtgaacttatgtcacctcaggtacta
atggctgtaagacaggctgttcagcgagcgcctcattacccagaatcacacaatataaat
ggcttggtctctgaagtgcgatcagattttcaatctgcaatcacgtcttaccaacatgcg
aaatttgctttaggcatgatgcgcagatccaagttggacaatagatatccttttgttgat
gtttcagtgaatcttgctcggtcactatgtaaggctggtcttgcaactgatgcagtgcgc
gagtgcgaagagttgaaaacacaaggactgctgaacgttgatggattgcaagtatatgct
cttgcattgtggaaacttggacggcatgatgaagctctttctatatcacgaaacttggct
gaaaacttatctaatatgaagcaggagagcgcaactggggcattgggattcatatgcacc
ttagcatacaacatagctgggaaggattctgcagcttcggtcattcatacactccctggt
caacccagttataacagagagttgaaattcatcatctctgcattagatgctttgcagcca
agcaagcgttttcagttacctcacttgagtacgcctcctagacttacatcctatgacgtg
atgagtgaagtccactcaaatattgctctggggaaggcaattggtggggaatcaaacaac
tgtttaggggccgagggtggtttgtcttacctgaaaaaggttctacacatgtatcctgac
tgcagtttagtaagaaaccatcttggatctctgctgctgtcgagcggagattggactgct
tctcacaaagcagtaagggttacttcgttgtcccatgggcacacatccaataggggccta
aggtctccgcatcaaattcaagcttgtgcaacaatgtcttgctatgctacctgcacctct
tatccaaagttctcattcccaacatgtgaagaccagtacctaagccaatacaatggaata
tgcaacctgcaaaggttggtccatcaagaaccatggaaccaagatgcacgctacttgctt
gtgcttgctattttccagaaagcacgtgaagagaagtaccccaaacatatttgtgccact
ttgaagaggctggttttacaaattatgtccagcagtagcaattcacaagagcataaactc
atcctttatgagaagtacttgctacttcttttgtcttcagaggttagtttgcaatctgat
gactatgaaaacggcatcgctcaagttacagatgctctaagagttgctcctccgagtgtg
gatactttctttgcacacttgcaactgtgtcgggcttatgtggtgcaaggcgatctttcg
aactccaggaaggaatacatgaaatgcttgcagaaccgcacgaatactgaggttggctgg
gtaacgctcaagcaacttgaatctttatgtttagtgaaccgtggctctgatgaaatagag
ataaatctgaaagaatgcattgaaaggaatggtagcttcccatcaaaatgggctgctctt
ttcaatctagcatgtgctcagtgttttatgcgggatgaggactttgcaagtgctgaaaaa
gctcttgcacaagcatgtgctgaaaaggatgctgatagctgcatcttattcctcaatgga
gctatgcatatggagattgcccgtaggtatgcagctcctcagtatataacccgcgcagct
tcgagcctcagaaaggcacagcagaagtctcaagctgccgtacccatcatatcactccta
ctggcccaagcagaaggcagcctcggctccaaagccaagtgggagaagaaccttcgcctc
gagtggttctcttggcccccagaactgcggcctgctgagctctacttccaaatgcacctg
ctggcgagccagtcgactgcggtaggtcctcagcagaagaaactgcaactggtggagacg
atgcagagtcccggggcgtggcttctgagggcgatacaccagaacccgtcttgctccagg
tactggaaggctttgctgcagcttgtgtgcgtgtag
DBGET
integrated database retrieval system
