Aegilops tauschii (wheat D): 109755429
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Entry
109755429 CDS
T04345
Name
(RefSeq) pre-mRNA-processing factor 19 isoform X2
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
ats04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109755429
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109755429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109755429
04121 Ubiquitin system [BR:
ats04121
]
109755429
03400 DNA repair and recombination proteins [BR:
ats03400
]
109755429
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109755429
Spliceosome [BR:
ats03041
]
Complex B
Other components
Prp19 complex
109755429
Complex C
Prp19-CDC5 complex
109755429
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
U-box type E3
109755429
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
109755429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EIPR1
PROPPIN
U-box
NBCH_WD40
WD40_like
RMC1_N
WDR90_beta-prop_4th
Beta-prop_DCAF4
zf-Nse
PUMA_CC
PAS_11
Motif
Other DBs
NCBI-GeneID:
109755429
NCBI-ProteinID:
XP_020169930
LinkDB
All DBs
Position
4D:500783008..500789301
Genome browser
AA seq
531 aa
AA seq
DB search
MICAISGEVPEDPVLSTNSGLLFERRLIQRYIEDHGKCPVTKEELAMDDLVTVKTNKIPK
PRPLQAASVPGLLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDESRTLLAQAERQIPISAAGPAPVAAVTNGKRALEDEVGPDGKKIRPGINPVIIDELT
ECNSVLSAQRKKRQVPPSLAPIDALERYTQISSHPLHKTNKPGILSIDIHHSKDIIATGG
IDTNAVLFDRPSGQVLCTLTDHSKKITSLKFVPRDELLITGSADKTVRVWQGNEDGSYGC
RHTMRDHGAEVEAVTVHASQKYFATASRDSTWCFYDISTGSCLTQVGEASGQDGYTSAAF
HPDGLILGTGTSEGVIKIWDVKSQARVAKFEGEVGHVGTVTAMSFSENGYFLATAALDGV
KLWDLRKLRNFRTLSPYDPDTPTSSVEFDFSGSYIAVAGSDIRVYQVANVKTEWNLVKTL
PDLSGTGKVTSVKFGADAKYVAVGSMDHNLRVFGLPGDEQMEEAKSESAAQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatttgcgcaatctccggcgaggtgccggaggacccggtcctgtcgaccaattcgggg
ctgctcttcgagcggaggctcatccagcgctacatcgaggaccatgggaagtgcccggtc
accaaggaggagctcgccatggacgacctcgtgacggtgaagaccaacaagattcctaag
cctagacctctgcaagctgcaagtgtccctggactccttggtatgtttcagaatgagtgg
gatgctctcatgctgtctaattttgctttggagcagcagctacatacagcaagacaagag
ctcagtcacgcgttataccagcatgatgctgcttgccgtgttatcgccagactaaagaag
gaaagagatgagtctaggacacttttggctcaagctgaaaggcagattcctatttcagct
gcaggacctgcgcctgtagctgctgttacaaatgggaaaagagctttggaagatgaagtg
ggtcctgatgggaagaagatacgtcctggtattaatcctgtcatcatcgatgaattaaca
gaatgcaattctgtgctctcagcacagcgcaagaaacggcaggtacctccaagtttagca
ccaattgatgcacttgaaagatatactcaaatctccagtcatccacttcacaagacgaac
aaaccagggattttatctattgatattcatcattcaaaggatattattgctactgggggt
atcgatacaaacgcagttcttttcgataggccgtcgggtcaagtcttgtgcactctcact
gatcactcaaagaagattacgagtttgaaatttgttccccgtgatgagcttttgataacc
ggatcagcagataagactgtccgtgtatggcaaggtaatgaagatggaagctatggttgc
aggcacacaatgagagatcatggtgcagaggttgaagctgtcacggtccatgctagtcag
aaatactttgcaactgcctccagagatagcacatggtgcttttatgatatttcaacaggg
tcttgcctcacacaggttggtgaggcttctggacaagatggatacacatcagcagctttc
cacccggacggtcttattcttggaacaggcacgtcagaaggtgttatcaaaatttgggat
gtaaaatcacaggcaagggttgcaaagtttgaaggggaggtcgggcatgttggaacagtg
actgccatgtccttctcagaaaatggatatttcctagcgaccgcagcccttgatggtgtc
aagctttgggatctacgaaagttgaggaattttaggaccctctctccatacgatccagac
acaccaacaagttctgtggagtttgactttagtggaagctatatcgccgttgccggttct
gatataagggtttaccaagtggccaatgtcaagacggaatggaatcttgtcaagacgtta
ccagatttatccggcacagggaaagtgacatcggtgaagttcggggcagatgccaagtat
gtggctgtaggttccatggaccacaacctgcgcgtattcgggctccctggagatgagcag
atggaggaggcaaaatcagaatcagcggcgcaatga
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integrated database retrieval system
