Aegilops tauschii (wheat D): 109755468
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Entry
109755468 CDS
T04345
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109755468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109755468
03012 Translation factors [BR:
ats03012
]
109755468
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109755468
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109755468
Translation factors [BR:
ats03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109755468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
ATPase
T2SSE
AAA_19
ABC_tran
AAA_23
NACHT
ATPase_2
AAA_16
Myosin_head
Motif
Other DBs
NCBI-GeneID:
109755468
NCBI-ProteinID:
XP_020169961
LinkDB
All DBs
Position
5:complement(479119280..479126330)
Genome browser
AA seq
1150 aa
AA seq
DB search
MRRVLRRGLGILLVPLPGPLSRPPPPPIPLAALLLLPRRLDAFSRRTFCGYSGGRAVEQF
SDDEYDHEYEDHRPSSSVANIDEWRWKLSMLQRNAEEQEIISRDRRDRRDYDQIANLAKR
MGLYSELYGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGFVQEHLDRSLLPF
DKDGGKTESGSEKAEQVNLDEKQDPLLDESVMEKILQRKSLRMRNFQRSWQESPEGAKMV
EFRKSLPAYKEKERLLAAIARNQVIVISGETGCGKTTQLPQFVLESEIESGRGAFCNIIC
TQPRRISAMAVAERVSTERGENLGESVGYKVRLEGIRGKDTHLLFCTSGILLRRLLSDRN
LNGVSHVFVDEIHERGMNEDFLLIVLKDLLSRRRDLRLILMSATLNAELFSSYFGGAPTI
HIPGFTHPVRAHFLEDILERTGYKMTASNQLDDYGQDKVWKTQRQLLPRKRKNQITTLVE
DALQNSNFETYGSRTRDSLANWNPDCIGFNLIEAVLCHICRKERAGAVLVFMTGWDDISS
LKDQLKAHPLLGDPNRVLLLACHGSMATSEQRLIFDKAPPNVRKVVLATNMAEASITIND
IVFVMDCGKAKETTYDALNNTPCLLPSWISKASSRQRRGRAGRVQPGECYHLYPRCVYDA
FAEYQLPELLRTPLNSLCLQIKSLQVDSIGEFLSAALQPPEPRAVQNAVEFLKMIGSLDE
NENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFLLPQDKKDLAG
TAKSRFSAKDYSDHMALVRAYEGWKDAEREGSGYEYCWRNFLSAQTLQAIHSLRKQFSYI
LKDAGLIDSDANTNNSLSHNQSLVRGVICSGLFPGISSVVHRENSMSFKTMDDGQVLVYA
NSVNAKYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGAVTKGSAAGHLKMLDG
YIDLFMDPSLSECYLQLKEELDKLVQKKLEDPTFDIHKEGKYILFAAQELAAGDLCEGRF
VFGRETSRARLRDNEDGKSNIIKDGMNPKSLLQTLLMRAGHTPPKYKTKHLKTNEFRAMV
EFKGMQFVGKPKRNKQVAERDAAIEALGWLTQTSGTKLQDEGDDSPLDLTDNMLKLLSRP
RKRTRNNPKK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgtcttgcggcgcgggctgggcatcctcctcgtcccactccctggcccactc
agccggccgccgccgccgccgatccctctcgctgctctcctcctcctcccgcgccgcctg
gatgccttctcccgacggaccttctgcggctacagcgggggccgcgccgtcgagcagttc
tccgacgacgagtacgaccacgagtacgaggaccaccggccgtcgtcgtcggtggcgaac
atcgacgagtggaggtggaagctgagcatgctgcagcgcaatgcggaggagcaggagatc
atctccagggaccggagggaccgccgggactatgaccagatcgccaacctcgccaagagg
atggggctctacagtgagctgtatgggaaggttattgttgcgagcaaggtcccgctaccg
aactacaggccagacctggacgacaagcgcccgcaaagagaggtggtgatcccgctaagc
ttgcagaggagggttgaaggatttgtgcaggagcaccttgaccgttcgctcttgccgttt
gataaagacggtggcaagacagaaagtggttccgagaaagctgagcaggtcaacttggat
gagaagcaggatcctctgctcgacgagtcggttatggagaagatccttcagaggaagagt
cttaggatgcgcaattttcaaagaagttggcaggaatcacctgaaggcgctaagatggta
gaatttcggaaatcactcccagcatacaaggagaaggaaaggcttctagcagccattgca
cgcaatcaggttatagttatttctggggagactgggtgtggaaaaacaacacagttgcct
caatttgtgttggagtcagagatagaatctggtcgaggggccttttgtaacataatctgt
acacagccacgaagaatatctgcaatggctgttgcagaaagggtatccaccgaaagagga
gaaaaccttggtgaatcggttggctacaaagttcgattggagggaattagaggaaaagat
acacatttacttttctgcaccagtggtattttactaagacgattgctgagtgaccgaaac
ttgaatggagtgtctcatgtatttgttgatgaaatacatgaaagagggatgaacgaagat
ttcttattgatcgttctaaaggacctattgtcacggcgccgcgatctaaggttgatattg
atgagtgctactttaaacgcggaactgttctcaagttattttggaggagcaccaactatc
cacattcctggattcacacatccagtgagggcgcattttctggaagacatattagagagg
acaggctataagatgacagcaagtaatcaacttgacgattacggccaagataaagtgtgg
aagactcagagacagctattgcccagaaaaaggaaaaatcaaattactacacttgttgag
gatgcccttcaaaattcgaactttgaaacctatggctcaaggacacgtgattctctggca
aactggaatcctgactgcatagggtttaatctcatagaggctgttctgtgccacatatgt
cgcaaagagcgagctggtgcagttttagtatttatgaccggatgggatgacattagctct
ttgaaggatcaattaaaagcgcatccgttgctaggtgacccaaatagagtgttgctgctt
gcatgccatggttccatggctacttctgagcagaggctaatatttgacaaggcacctcct
aatgttcggaaggtagtacttgccactaacatggcagaagcaagtattaccataaatgac
attgttttcgtcatggattgtggaaaagcaaaggaaaccacatacgatgctctaaacaac
actccctgcttactcccctcatggatttcaaaggcttcttcccgtcagaggaggggcaga
gctggtcgtgtacaacctggagaatgctatcatctctaccccagatgtgtatatgatgca
tttgcagagtaccagcttccagagcttcttaggactcctttgaattcactatgtttgcag
ataaaaagtttgcaggttgacagcattggggagtttctatcagctgctttgcagcctcca
gaaccacgagccgtccaaaatgcagtggaattcctgaagatgatcggatcattagatgag
aacgagaaccttactgatctaggaagatacctctccatgcttccggttgatccaaagttg
gggaagatgcttataatgggtgcagttttccgttgcattgaccctatacttactgtggtt
gctggattgagtgcccgggatcctttcctgttgccacaggacaagaaagatttggcagga
actgcaaaatcaagattctcagcgaaagattatagtgatcatatggcccttgtccgagct
tatgaaggatggaaggatgctgagagggaaggatctggttatgagtactgttggaggaat
ttcctttctgctcaaacactacaagccattcattctcttcgaaagcaattcagctatatc
ttaaaggacgccggtttgatagactctgatgcaaatacaaataatagtttgagccataat
caatcattagttcgtggcgtaatttgttctggactttttcctgggatatcatctgttgtg
cacagggaaaactccatgtccttcaagaccatggatgatggccaagttcttgtttatgct
aattctgtgaatgctaagtaccagaccatcccttatccatggctggtctttggtgagaag
gtgaaggtaaatgctgtcttcatccgtgattcaactggagtatcagattccatactgatc
ttatttggtggtgctgtcacaaaaggaagcgcggctgggcatttgaagatgcttgatggt
tacattgatctatttatggaccccagcctgtcagagtgctacttgcaacttaaagaagaa
cttgataaacttgtacagaagaagcttgaagacccaacctttgatattcacaaggaaggc
aagtacattttatttgctgcacaagagcttgctgcaggcgacctatgtgaaggaaggttt
gtgttcggccgagaaacgagcagagctaggcttcgggacaacgaagacggcaaaagcaac
atcataaaggatggtatgaacccaaagagcctgctgcagaccttgctgatgagggcaggc
cacacgcctccaaagtacaagacaaagcacctcaagaccaacgagttcagggccatggtg
gagttcaaagggatgcagttcgtcgggaagccgaagaggaacaagcaggtcgcggagagg
gatgccgcgatagaagcgctgggatggttgacacaaacgtccggtacgaagctccaggac
gagggtgacgactccccgctcgacctgaccgataacatgcttaagctgctttctagacca
aggaaacggacgagaaataatccgaagaaatga
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