Aegilops tauschii (wheat D): 109755586
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Entry
109755586 CDS
T04345
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ats03036
]
109755586
Enzymes [BR:
ats01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
109755586
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
109755586
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
109755586
NCBI-ProteinID:
XP_020170071
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MGGKTIQVSGFPSTVNADHVKDLLEQIVGTGNVFAIKLRPPKNISANSKSFAIVQFQSEA
HASLVLNAARRNALRSGSNHLKARYAERDIVPRPRTTIFNLQDATLHFGCLLREKALSVL
WSGTNVSVEFGFAMKRIDFCLIYNSKKYKLELSYESIWEIQLHRPPGLQKKFLLIQVQAA
PKIYEQNIRRSGSMYDDPLFNYFRDDTDDQWTRTTDFTPSASIGQSYILCLELPHICYLP
NIREYFVYYEVHDDVFHLQRGHSYSSNTCFVPVVKSHHFTDVPYEILFKINHLVQNGTLS
GPTLDDNFYRLVSPGYECIDHIKRALEKMSYLKKTCLNPTKWLSEQYKKKRRSRYMLKLP
NITLDDDGLVYVYRVQITPAKVYFYGPEINVSNRVVRHYAADLDNFLRISFVDEDCEKLR
STDLSQRSAPGNNTRRTALYNRVLSVLSNGITIGDKHFDFLAFSSSQLRDNSAWMFASRP
GLSASDIREWMGDFRNIRNVAKYAARLGQSFSSSTETLKVHKYEVKEAPDVTNGTKYVFS
DGIGTISADFADEVSKKCNLTRFTPSAFQIRYGGYKGVVAIDPTSRWKLSLRKSMSKFQS
ENITLDVLAYSKYQPCFLNRQLITLLSTLGVRDSIFELKQQEAVKQLNRMVAEPQAAIDA
IELMPMGEVTNVVKELLLCGYQPDLEPYVSMLLQTFRASKLLELKTRSRIFVPKGRAMMG
CLDETRTLKYGQVFIQASNSADDRGKSIVTGKVVVAKNPCIHPGDIRILQAVQSPLLGHM
VNCVVFPQLGPRPHPNECSGSDLDGDIYFVSWDPDLIPTRMVAPMDYTPAPTETLDHDVM
IEEVHEYFTNYIVNESLGIIANAHVVFADREILKAESTPCIKLAELFSIAVDYPKTGVPA
QIPPELHVKEYPDFMEKLDRATYVSEGIIGKLYREIKKQNPHIGHFTKDVARRSYDTDLI
VDGYQDYITEAVWFKEQYDFKLGNLMEHYGINSEAEIISGCILKMANNFTKKNDADAIRL
AVKSLRKEARSWFSEMGSDESGDGHEASDAKASAWYHVTYHPEYWGCYNEGYDHRPHFIS
FPWCVYDKLIQIKRKKNFVRKMLDLQNRMRRSTIFG
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagactattcaggtgtcagggtttccttcaactgtcaatgctgaccatgtc
aaggatttgttggaacaaattgttggtactggcaacgtctttgcgatcaagctcaggccc
ccaaagaacatctctgcaaactcaaaatcttttgccattgttcagttccagtccgaggca
catgcttcgctggtgttgaatgcggcccgacggaatgcacttaggagtggaagtaatcat
ctgaaggcccgatatgcagagcgtgacattgttccaagaccaagaactacgatttttaat
ctacaggatgcaacactgcattttggctgccttctgagggaaaaagctctatctgttctg
tggagcggaacaaatgtttccgttgagtttggatttgctatgaagaggattgacttttgc
ctgatctacaactcgaagaaatacaaacttgaactctcctacgagagcatatgggagatc
cagcttcatcgtccacctgggttgcaaaaaaagttccttctgattcaggttcaagctgcc
ccgaaaatttatgaacaaaacatacgccgttctggttctatgtacgatgatcctttattc
aactattttagggatgatacagatgaccagtggaccagaacaactgattttactccatca
gccagcattgggcaatcatatatcctatgtctggagctaccacatatttgttatctcccg
aacatccgagagtactttgtttactatgaagtacacgatgacgtcttccatctccagcgt
ggacattcatattcaagcaatacttgctttgttccagttgtgaaatctcatcatttcact
gacgtcccctacgagatactctttaagatcaaccacttggttcagaatgggacacttagt
gggccaacacttgatgacaacttctaccgtctggtcagcccaggatatgaatgtattgac
catataaagcgtgcacttgaaaagatgtcatacctaaaaaagacttgtttgaatccaaca
aagtggttatctgaacaatacaaaaaaaaacggagatcacgctacatgttaaaattacca
aacataaccctggatgatgatgggttggtatatgtctacagggtgcaaattacccctgcg
aaagtgtacttttatggtcctgagattaatgtctcgaatcgtgttgtacggcattacgct
gctgatttggataacttccttcggatttcgtttgttgatgaggactgtgagaagcttcgt
tcaactgatttatcacaacgctctgctccaggaaataatacaaggaggactgctctttat
aacagagttctttcggtcctttcaaatggcatcactatcggtgacaagcactttgacttt
ctggctttttcttcaagccagctccgagataactctgcatggatgtttgcttctcggccg
gggttatctgccagtgacatcagggagtggatgggggacttccgtaatattagaaatgtg
gcaaagtatgctgcaaggcttggtcagtcttttagttcctcaacagaaactttgaaagtg
cataagtacgaggtgaaagaagctccagatgtaacaaacggaacaaagtatgtattctcg
gatggaattggaaccatttcagctgattttgcagatgaagtgtctaagaagtgcaacttg
acccgctttactccctccgctttccaaataaggtatggaggttacaaaggtgttgtcgct
attgatccaacatcacgctggaaactatctttaagaaaaagcatgtcaaagtttcagtca
gaaaacattacacttgatgtccttgcatacagcaagtaccagccatgtttcctgaaccgg
cagttaatcactcttctttcgacactcggagtcagagatagcatatttgaactgaagcaa
caagaagctgtgaagcagttgaacagaatggtagctgaaccacaagctgctattgatgca
attgagcttatgcccatgggtgaggttacaaatgttgttaaagagttgctgttatgtggc
taccagccggatcttgaaccatatgtttctatgcttctacaaacctttagagcatccaag
ctgctagaattgaaaacgaggtcaaggatatttgtcccaaaaggacgagcaatgatggga
tgcctggatgaaacccgcacactgaagtacggacaggtattcattcaagcttctaatagt
gcagatgaccgtggaaagtccatcgtaactggaaaagttgtcgttgccaaaaacccttgc
atccaccctggtgatatccgtattctccaggctgttcaaagtcctcttctgggccacatg
gttaactgtgttgtctttccacagctggggccaaggcctcatcctaatgaatgttcaggg
agtgatcttgatggggacatatattttgtttcatgggacccagatctcattccaactcgt
atggtggcgcctatggactatactccagcaccaacagaaacattagaccatgatgttatg
attgaggaagtacatgagtatttcacaaattacatagttaacgagagtctgggaattatt
gccaacgcgcacgtagtctttgcggatagggaaatcctgaaggctgaaagtacaccatgc
attaagctggcagagctcttctccattgctgttgattacccaaagacaggagtgccggct
caaattccgcctgaactacatgtgaaggagtatccagatttcatggagaagctcgacagg
gctacctatgtatccgagggaataatagggaagctctaccgggaaattaagaagcagaac
cctcacattggacacttcacaaaggatgtggcaaggcggtcttatgacactgatttgata
gttgatggctaccaagactacattaccgaagctgtgtggttcaaggaacagtatgacttc
aagctgggtaatctgatggagcactacggaataaatagtgaggctgagataataagtgga
tgcattcttaagatggcaaataattttaccaagaagaacgacgccgatgctatcagactg
gcggtgaaatctttgcggaaggaagcaaggtcatggttcagcgagatgggttcagatgag
agcggagatggtcacgaggcctcggacgccaaggcatccgcttggtatcatgttacctat
caccctgagtactggggttgctacaatgaaggatatgatcaccggccacacttcatcagc
tttccgtggtgtgtctatgacaagctgattcaaatcaagcggaagaagaactttgtcagg
aagatgctcgatctccagaacagaatgagacggagcacgatattcgggtga
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integrated database retrieval system
