Aegilops tauschii (wheat D): 109755644
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Entry
109755644 CDS
T04345
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109755644
09122 Translation
03013 Nucleocytoplasmic transport
109755644
03015 mRNA surveillance pathway
109755644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109755644
03041 Spliceosome [BR:
ats03041
]
109755644
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109755644
TREX complex
109755644
Spliceosome [BR:
ats03041
]
Complex C
Other components
EJC/TREX
109755644
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109755644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
109755644
NCBI-ProteinID:
XP_020170128
UniProt:
A0A453BGG6
LinkDB
All DBs
Position
2:289223429..289241513
Genome browser
AA seq
269 aa
AA seq
DB search
MSSGLNMSLDDLIKQSKSRPKANPAFSSGPTRRAAPSARTMPYPPSAPKAATADSLYGVY
SEHVAAMATSPPPPVAGPQALETGTKLHISNLDSSVTVEDVQELFSEIGELKRYSVNYDK
DGKSQGSAEVVFARKVDALDAIERYNGVLLDGKPMKIELIGNKTEPHPTEPLMYNGTSSN
YNATPNSLLQRGDPRGPFHGNGRSGGSGQGGAGKRGMFQGNVRPGNTVQDGGGRGQGRAR
GHDRSRVPASAADLDAELEQYHAAAVKQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtggcctgaacatgtccctagacgacctcatcaagcaatccaagtccaggccc
aaagccaaccccgccttctcttccgggcccacccgccgggcggcgccgtccgcccggacc
atgccctacccgccgtctgctcccaaggccgccaccgccgactctctgtacggtgtctac
tccgagcacgttgccgccatggcaacctccccgccaccgccggtggctgggccacaggca
ctcgagacgggcacgaagctgcacatctccaacctcgactccagcgtcaccgtcgaggac
gtccaggaactcttttcagagattggtgagctcaaacgttattctgttaactacgataag
gatgggaagtctcagggaagtgcggaagttgtctttgcaagaaaagtagatgctttggat
gctattgagagatataacggtgttctgcttgatgggaagccaatgaagatagagctcatt
ggaaataagaccgagccacacccaacagaacctttgatgtacaacggcacttcttctaac
tacaatgcaactccaaacagtttgcttcagagaggtgacccgagagggccatttcatggt
aatggtcgttctggaggcagtggtcagggcggtgctggcaaaagaggaatgtttcaaggc
aacgttcgtcctggaaacactgtgcaggacggtggtgggcggggtcagggcagagccaga
gggcatgatcgcagccgagttccggcctctgctgcggatcttgatgctgaactggagcag
tatcatgcagcagcagtgaagcaaaaatga
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