Aegilops tauschii (wheat D): 109756647
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Entry
109756647 CDS
T04345
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109756647
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109756647
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109756647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8
VPS18_RING_C
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
109756647
NCBI-ProteinID:
XP_020171082
UniProt:
A0A453DL14
LinkDB
All DBs
Position
2:649931833..649936710
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AA seq
527 aa
AA seq
DB search
MKSSQGAMLSPLCLWAVVCLMAQIGAANVVLMGNNLTLSFDDVEANFSPAVKGSGVNGLV
YTAEPLNACSALTSKAVEGPPSPFALVIRGGCTFDEKVKNVQDAGFKAAIVYDNENSGVL
VSSVTVAGSSSGIQIYAVFISKVSGEVLKKFSGRTDVEVWIIPTFENSAWSIMAISFISL
LAMSAVLATCFFVRRHRIRRDRPRNLDSREFHGMSSQLVKAMPSLIFTKVQEDNCTSSMC
AICLEDYTVGEQIRVLPCRHKFHAACVDMWLTSWRSFCPVCKRDAGAGMSGPPASETTPL
FASAGHLPSPSSSFRSSMGASPPRPISRRPSSQSISRVYSASGTPHSLNTQRPFRNSSAM
SISRSSADLANMSSPYLRTSLLRGGSTHSLVGNHLSPPVNISYACAPPQMYNSGYASPSP
HAGSSYISNSGYGSSSGYYLGSSSQHRSSAYLRHCGESGPSLSTMAPQSPQQQQPQLLRH
GGDSDASLNLAGASSAQSFRQSYLRHCGDSDASLSAMASSGQSLPGC
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttctcaaggagcaatgttatctcctctctgtctctgggcagtggtttgcctc
atggctcagataggagctgccaatgtagttctgatggggaataatcttactttgtcgttc
gacgatgttgaggcaaacttttctccggcagtaaaagggtcaggtgttaatggcttagtt
tatactgccgaacctttgaatgcctgcagtgcattgacaagcaaggcagtcgagggtcca
ccgtctccgtttgccctggttataagaggtggctgcacatttgatgagaaagtgaaaaac
gtgcaggatgctggattcaaagctgcaatagtgtatgacaacgaaaacagtggagttctg
gtttcaagtgtaacagtggctggaagctcaagcggtattcagatatacgctgtgttcatc
tcaaaggtctcaggggaggtgctgaagaaattttcaggccgtactgatgtggaggtgtgg
ataataccgacatttgagaactcagcctggtcgatcatggcgatttcattcatatcactg
ctcgccatgtctgctgttttagctacctgtttctttgtgagaagacatcgaataaggcgg
gaccggcctagaaatctagattcccgagaattccatgggatgagcagtcaattagttaag
gcgatgcccagccttattttcaccaaagtgcaagaggacaactgcacgtcgtcgatgtgt
gccatttgcttggaggattacactgtcggagaacagataagagtgctgccttgccgtcac
aagttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgccccgtg
tgcaagcgagatgcaggcgctggaatgtcaggcccccctgcctcagaaaccaccccattg
tttgcttccgcaggacacttgccttctccgtcatcctcattccggtcgagcatgggagca
tcccctcccagaccaataagccggcgtccttcgtcgcagtccatatctcgggtctactct
gcttccggtaccccgcactctctcaacacccaaaggcctttcagaaactcatcggccatg
agcataagcagaagcagcgcagacctcgcaaacatgtcctcgccctacctccgcacctcc
ctcctccgcggaggctccacacactccttggtcggcaaccacctgtctccaccagtcaac
ataagttatgcttgtgccccaccgcagatgtacaattctggctacgcgtcgcccagcccg
cacgccggttcttcatacatctccaattcgggatatggatcatcgtcgggctactacctg
ggctcatccagccagcaccggtcttcggcgtacctgaggcactgtggggagtcggggccg
agcctgtccaccatggcccctcagtcaccacagcagcaacagccccagctgctgcgccat
ggcggcgactcggacgcgagcctaaacctggcgggcgcgtcgtcggcccagtccttccgg
cagtcgtacctgaggcactgcggcgactcggacgcgagcctgtccgccatggcgtcgtcg
gggcagtcgctaccgggatgttga
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