Aegilops tauschii (wheat D): 109756743
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Entry
109756743 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14 isoform X3
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109756743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109756743
03009 Ribosome biogenesis [BR:
ats03009
]
109756743
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109756743
Spliceosome [BR:
ats03041
]
Complex A
U1 snRNP components
U1 related factors
109756743
Complex B
109756743
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
Pre-60S particles
Helicases
109756743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
109756743
NCBI-ProteinID:
XP_040259504
LinkDB
All DBs
Position
3:94259515..94264501
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AA seq
650 aa
AA seq
DB search
MASAAPRYAPPDPTLPKPWRGLIDGTTGYLYFWNPETKAVTYDRPTGPPPPVAPAPAPAP
APAPAPVQQPQYHHDERARPRDQPERHTESGNRVQNAPFADHKARNDPSFEQRFSAGANP
APVPSTNPAPQADNGNMSVDAYRKKHEITIICPGREAPSPFMSFQSTGFPSEILREVQQA
GFKAPSPIQAQSWPIALKGSDIVAVAKTGSGKTLGYLLPGFILVKNLRHNSRDGPTVLVL
SPTRELATQIQDEAIKFGRSSRISSTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE
MGKVSLRQVAYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPREVRKIASDL
LTNPVQVNIGNTDELVANKSITQHVEVTTSFEKGRRLDQILRQQEPGSKVIIFCSTKRMC
DQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN
YDFPTGVEDYVHRIGRTGRAGATGIAYTFFCDQDSKYASDLVKILEGANQNVSPELRAMV
GRGGYGGRGPRRWASSNDSYGGQGAYGSQTRDGPSFQSSYNNSSSGNQYGGAPSFHSSSN
NQTSGAASLPASGGSGEGLSFHDRFYSGNSRGGDRARSRSPPKAVGVSNW
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggcgccgcgctacgcgccgccagatccgacgctgcccaagccctggagg
ggcctcatcgacggcaccaccggctacctctacttctggaacccggagaccaaggccgtc
acctacgaccgccccaccggcccccctccccccgtcgcccccgctccggcgccggccccg
gccccggcccccgctcccgtccagcagccccagtaccaccacgacgagagggccaggccc
agagaccagcccgagcggcacactgaatccggaaaccgcgtgcagaatgcgccctttgct
gatcacaaggccaggaacgatccttcttttgagcagcgcttttcagctggagcaaaccct
gcacctgtgccttctactaacccagctccacaggctgacaatggaaacatgtcggtagat
gcataccgtaaaaagcatgagattactattatttgcccgggacgtgaagctccatcgcca
ttcatgtcgtttcagtccacaggcttcccttcggagattctaagggaggtgcagcaagca
ggattcaaagcaccaagtcctatccaagctcaatcgtggccgattgctctaaaaggtagt
gatattgtagctgtggcgaagacaggttctggaaaaaccctgggttatctacttccaggg
tttatacttgttaagaacctacggcacaattcaagggatgggccaactgtgttagttctg
tctccaaccagggaattggcaacacagattcaagatgaagcaatcaagtttggtagatca
tcaagaatttcatctacttgtctatatggcggtgctccaaaaggccctcagctaagagat
ttagagcgtggtgctgacattgttgtcgcaactcctggtagactgaatgatatactagaa
atgggaaaagtcagtctccgtcaggtagcttatctcgttcttgatgaagctgaccgcatg
cttgatatggggtttgagccacaaataagaaaaattgtgaaacaagtgcaaccgaaacgg
caaactcttatgttcactgccacttggccaagagaggtgaggaaaatagcttccgatttg
ctcactaaccctgtccaggttaacattgggaacactgatgagctggttgcaaataagtca
atcacccagcatgtggaagttaccacatctttcgagaaagggaggcgccttgatcagatc
ttgagacaacaggagcctggatctaaggtgattatattttgctccacgaagaggatgtgt
gatcagctgtctcggaacctatcacggcagtatggtgcttctgctattcatggtgataaa
tcacaggctgagagggactctgtgctgagtgaatttaggaccggcaggtgcccaattctt
gtagccactgatgtggctgctcgaggcttagacgtgaaggacatcagggttgttgttaac
tatgatttcccaacgggtgttgaggactatgtccatagaattgggaggacaggccgggct
ggtgcgactggaattgcatacacattcttctgtgaccaggattctaagtatgcttcagat
cttgtgaagattttggagggtgcgaaccaaaatgtttcgccagagttacgagctatggtc
ggccgtggagggtatggtggcagggggccacggcggtgggcatcttctaatgattcctat
ggtggccagggagcttatggcagccagactagggatggtccaagctttcagtcgagctat
aataacagcagcagtggcaatcaatatggtggcgctccaagcttccattccagtagcaac
aatcagaccagtggcgctgcaagtttacctgccagtggcggctctggtgaaggtctcagc
tttcatgataggttctatagcggcaattcccgtggtggtgaccgtgctaggagcaggagc
cctcccaaggccgtgggggtctccaactggtaa
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