Aegilops tauschii (wheat D): 109756807
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Entry
109756807 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109756807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109756807
03009 Ribosome biogenesis [BR:
ats03009
]
109756807
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109756807
Spliceosome [BR:
ats03041
]
Complex A
U1 snRNP components
U1 related factors
109756807
Complex B
109756807
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
Pre-60S particles
Helicases
109756807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
QCR10
Motif
Other DBs
NCBI-GeneID:
109756807
NCBI-ProteinID:
XP_020171231
UniProt:
A0A453E5C6
LinkDB
All DBs
Position
3:60857353..60861320
Genome browser
AA seq
496 aa
AA seq
DB search
MSRFDGRAADPSSYRDRRSEGAFGGGTRAFAPSGKPDAAAAAAAAELDGLPRFEKNFYVE
VPAVAGMTAEEVEAYRRRREITVEGNDVPKPVRDFRDVGFPEYVLQEITKAGFTEPTPIQ
SQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAV
QIQQETTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMMESHHTNLRR
VTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVELLARTFLFDPYKVI
IGSEELKANHAICQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRM
DGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLE
DYVHRIGRTGRAGATGTAYSFFTAANARFAKDLISILVEAGQKVSPELANMGRGAPPPSL
GHRDRYRGHGGGRSWS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttcgacggccgtgcggcggaccccagctcctaccgcgaccgccgcagtgag
ggggcgttcggtggcgggacgagggcgttcgcgccgtcgggaaagccggatgctgccgcc
gcggcggccgcggcggagctggacgggctgccgcggttcgagaagaacttctacgtggag
gttcccgcggtggccggcatgacggcggaggaggtcgaggcctaccgccgccgccgggag
atcaccgtcgagggcaacgacgtgcccaagccggtgcgcgacttccgcgacgtcggcttc
ccagaatacgtgttgcaagaaatcacaaaagctggctttacagaacctacccctatccag
tcacaaggttggccaatggcactgaaggggcgtgatcttattggcattgctgaaacagga
tctggaaaaacacttgcttaccttttacctgccattgttcatgttaatgctcagcctatt
ctagctcctggtgatggtccgattgttcttgtgttagcccctacacgtgaacttgctgtc
cagatacagcaggagacaacaaaatttggtgcatcatcaaagataaaaagcacatgcata
tatggtggtgtcccaaaaggtcctcaagttcgtgatcttcaaaaaggtgttgaaattatt
atagccacgccaggaagactaattgatatgatggaatcacatcacacaaatttgcggagg
gtcacataccttgttttagacgaggcagatcgaatgctagacatgggttttgaacctcag
attaagaaaattgtttctcagattcgtccagatcgacaaactctttactggagtgctacc
tggccaaaggaagttgagctgctagcaaggactttcctttttgatccatacaaggttata
attggttctgaagaactgaaagctaatcatgccatttgtcagcatgtagagatattatct
gagagccagaagtataacaagttggtcaatctactggaggatataatggatggcagccga
attttaatattcatggacaccaagaaagggtgcgatcagatcaccagacagcttcgaatg
gatggttggcctgctctgtctatccatggtgacaagagccaagctgaaagagattgggtt
ctttctgaattcaagtcagggaaaagccccattatgacagctactgatgttgctgctcga
ggcttagatgttaaggatgtcaagtatgtcattaactatgactttccggggtctctggag
gattatgttcatcgcattggtcgaactggcagagctggagcaacagggacagcctacagc
tttttcacggctgctaacgccagatttgccaaggatcttattagcattttagttgaagcc
ggacagaaggtcagccctgaattagctaatatgggccgtggtgcaccacctccttctttg
ggtcatcgtgatagatacagagggcatggaggtggtcgttcatggagctga
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