Aegilops tauschii (wheat D): 109757290
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Entry
109757290 CDS
T04345
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04120
Ubiquitin mediated proteolysis
ats04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109757290
04120 Ubiquitin mediated proteolysis
109757290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109757290
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109757290
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109757290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
zf-RING_11
zf-RING_5
zf-HC5HC2H
U-box_ZFPL1
FAR1_N
Motif
Other DBs
NCBI-GeneID:
109757290
NCBI-ProteinID:
XP_020171703
UniProt:
A0A453ENJ4
LinkDB
All DBs
Position
3
Genome browser
AA seq
507 aa
AA seq
DB search
MIRLQTYAAFSLLATTSAVYYAFSSREQFYPAMVYLSSSKICFVLLLNTGLVAMCTTWQL
VKRIFLGTLREAEVEQLNEQSWREVVEILFAVTIFRQDFSVAFLAMVAALLLVKALHWLA
QKRVDYIETTPSVPMLSHIRIVSFMVFLLAVDCIFLSRSLMPLIKNREASVAIFFSFEYM
ILATSTVSIFVKYVFYVSDMLMEGQWEKKAVYTFYLELISDLVHLFLYMLFFVAIFLNYG
VPLHLIRELYETFRSFRIRVSDYVRYRKITSNMNERFPDATADELNASDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIVPPDNGRTASAQQHGAQPGVQLAAGIG
APGSEGATSENMNRRQAKLEAAASAASIYGRSFAYPPTNTLNRYSGPLRATSGTSQSGEA
STSNQSQNNQSLQWPNNQDLSAPQPFISHGPASSATINRDLENSLQKTYENAIRSQIEML
QIQLQMVQQGATALATNNEKAEQAKNE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtctgcagacgtacgcggcgttcagcctgctggcgacgacgtcagcggtgtac
tacgcgttcagcagcagggagcagttctaccctgcgatggtctacctctcctcgtccaag
atctgctttgtgctgctcctcaacacgggcctcgtcgccatgtgcaccacctggcagctc
gtcaagcgcatcttcctgggcacgctccgtgaggccgaggttgagcagctcaacgagcag
tcctggagggaggtcgtggagatcctctttgcggtcaccatcttccgccaggacttctcc
gtcgccttcctcgccatggtcgccgcactgctactcgtcaaggcgctgcattggctcgca
cagaagagggtcgactacattgagaccacgccctctgtgccgatgctgtcgcacataagg
attgtgtccttcatggtgttcctgcttgccgtcgactgtatcttcctgtcgagatccttg
atgccactgataaagaaccgggaggcgtctgttgcaatcttcttttcctttgagtatatg
atactagcaacatcaacggtatcgatattcgtgaagtatgtattctatgtcagcgacatg
ctaatggaaggtcaatgggagaaaaaggcagtgtatacattttatttggagctcatcagt
gaccttgtgcacttgtttttgtatatgctcttcttcgtagctatcttcctgaactatggt
gtcccattgcacttgatccgtgagctgtacgagaccttccgcagcttcagaattcgtgtt
tcagattatgtgcgctacagaaagataacttccaacatgaatgaacgctttccagatgct
acagctgatgagcttaatgcgagtgatgctacatgtattatctgtcgtgaagagatgaca
acagcaaagaagctgctttgtgggcacttgttccatgtgcattgtttgaggtcatggcta
gagcgccaacatacttgccccacatgtagagctcccattgtccccccggacaatggacgt
actgcatcagcgcaacagcatggagctcaaccgggtgttcagcttgctgcaggcatcggc
gctccaggttcagaaggagcaacaagtgagaacatgaacaggcgtcaagcaaaacttgag
gctgctgcttcagctgcttccatatatgggagatcttttgcttatcctccaacaaacacc
ttgaataggtattcaggacctctgcgtgctacatcaggtacttcacaatcaggagaagca
agtacttccaatcaatcgcagaacaaccaatcattgcaatggccgaacaatcaggatctc
tcggcacctcagccttttatttcacatggtcctgccagctcagcaacaatcaacagggac
cttgaaaattcactacaaaagacttacgaaaacgctataaggagccagatagagatgttg
caaatccaattgcaaatggtgcagcaaggggcaacagcgttggcaactaacaatgagaaa
gctgaacaagcgaaaaatgagtga
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