Aegilops tauschii (wheat D): 109757500
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Entry
109757500 CDS
T04345
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109757500
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109757500
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109757500
NCBI-ProteinID:
XP_020171909
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Position
3:433943464..433944892
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AA seq
378 aa
AA seq
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MALKELLMFVTLLFLLLRAATANHRHENVIDRCWRGQPNWATDRQRLAMCSVGFVGKMRQ
NRGHGVTAYTVTDPSDDPVRPRPGTLRYGATVLPGKVWITFRPGSMHIRLAQPLFVKSFT
AIDGRGADVHVAGGAGIVLYEVSNVVIHGLHVHGIRAQPPGRVVRPGGAVQNMDVGDGDA
IRLLSSSKVWIDHNTLSRCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDQHVADRR
MRVTVAFNRFGPNVNQRMPRIRHGYAHVVNNFYDGWREYAIGGSMGPTVKSQGNLFIAST
AESANVTRRMPVGHAAGKDWHWHSSGDSFENGAVFKQTGSKVRPNYNKHQAFPAVSASEV
RSLTKDAGALRCSARAAC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaaggaattactcatgttcgtcaccctcctcttccttctcctccgagcagcc
acggcgaaccaccggcacgagaatgtcatcgaccggtgctggcgtggccagcctaactgg
gccaccgaccggcagcggctcgccatgtgctccgtgggcttcgtggggaagatgcggcag
aaccgtggccacggggtgaccgcgtacacggtcaccgacccgagcgacgaccccgtgcgg
ccccggcccggcacgctgcggtacggcgcgacggtgctgccggggaaggtctggatcacc
ttccggccgggcagcatgcacatcaggctggcgcagccgctcttcgtgaagagcttcacc
gcgatcgacggccggggcgccgacgtgcacgtcgcggggggcgctggcatcgtgctctac
gaggtgagcaacgtggtcatccacgggctccacgtgcacggcatccgcgcgcagcccccc
gggcgggtcgtccggcccggcggcgccgtgcagaacatggacgtcggcgacggcgacgcc
atccggctgctgtccagctccaaggtgtggatcgaccacaacacgctgtcgcgctgcgag
gacggcctcctcgacgtgacgctcgggtccacggacgtgaccgtctccaacaactggttc
catgaccacgacaaggtgatgctgctgggccacgacgaccagcacgtcgccgaccgccga
atgcgggtcaccgtggcgttcaaccgcttcgggcccaacgtgaaccagcgcatgccgagg
atcaggcatggctacgcccacgtcgtcaacaacttctacgacgggtggagggaatacgcc
attggcgggagcatgggccccactgtcaagagccagggcaacctgttcatcgcctccacg
gcggagagtgccaatgtgacgagaaggatgccggtcggacatgccgccgggaaggactgg
cattggcactccagtggggactcgtttgagaacggcgccgtcttcaagcagacgggcagc
aaggtgcgcccgaattacaacaagcaccaggcgttcccggcggtgagcgccagcgaggtg
agatcgctgaccaaggacgccggtgctctgaggtgctccgccagggccgcgtgctga
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