Aegilops tauschii (wheat D): 109757551
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Entry
109757551 CDS
T04345
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109757551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109757551
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109757551
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109757551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
109757551
NCBI-ProteinID:
XP_040248072
UniProt:
A0A453NF14
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All DBs
Position
6D:114912394..114922913
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AA seq
294 aa
AA seq
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MGDLHLRLNQTQRVRLEAALHELQALAPAAAAVTFADNIPVNPEDTILKGHGTSDQDGEV
VATVCGVVERVQNLVCVRTLRARYKPQKGDIIIGRVSEIASKRWRLETNFSQGAVLMLSS
MNLPDGIQAEVCHIQHDGSLDLQPRSQKYGKLQRGQLLTVPAYLVKRRKQHFHHLEQYDA
DLILGCNGFVWVGEHAVVDEETNSNEDQHKLSMEVEAFTPLETRRHICRLANAVRVLSAL
GFTLTVELIIQTAEAGLSSDVEINNMLGAEFYVQTAEREAKRRADLSRRMNGPR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgggagacctccacctacgactgaaccagacacagagggtccgcctcgaggccgcactc
cacgagctccaggccctcgcccccgccgccgccgccgtcaccttcgccgacaacatcccc
gtcaaccccgaggacaccatcctcaaggggcatggcacgtctgatcaggacggggaggtt
gtggcgacggtgtgcggcgtggtggagcgggtccagaatctcgtctgcgtgaggacgctc
cgggcaaggtataagccacagaaaggggatatcattattggccgtgtcagtgagattgct
tctaagcgctggaggttggagacaaactttagccaaggtgctgttctgatgctttcttct
atgaatttgcctgatggaatccaggctgaagtttgtcatatccaacacgatggatctctt
gacctacagccaaggagtcagaaatatggaaagcttcagaggggtcagttgctcacagta
cctgcctatttggtaaaacggcgaaagcagcatttccatcatcttgagcaatatgatgcc
gatttgattctcggttgcaatggattcgtctgggtaggcgagcatgccgtggtggatgaa
gagactaattcgaacgaagatcaacataagttgagcatggaagtggaggcttttacccca
ctagaaactagaaggcacatttgccggcttgccaatgccgtgcgcgtgctttcagccctt
ggattcacccttactgtcgaactgataatccaaaccgctgaagcaggtctatcatcagac
gtcgagataaacaacatgctcggagctgaattttatgtccagacagcggagagagaggcc
aagcgtcgagccgatctctcaagaaggatgaacgggccaaggtaa
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