Aegilops tauschii (wheat D): 109759070
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Entry
109759070 CDS
T04345
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109759070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109759070
Enzymes [BR:
ats01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
109759070
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
109759070
DNA repair and recombination proteins [BR:
ats03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
109759070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
109759070
NCBI-ProteinID:
XP_020173500
UniProt:
A0A453A9I2
LinkDB
All DBs
Position
2:11677334..11682522
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AA seq
412 aa
AA seq
DB search
MPELPEVEAARLALEEHCVGKRIVRCSAAEDTKVIDGVAPSRLEAALVGRTIAAARRKGK
NLWLVLDSPPSPSFQFGMAGAIYIKGVELSKYKRSAVSPTEEWPSKYSKLFVELDDGLEF
SFTDKRRFAKIRLLDNPEAVPPISELGPDALCEPMQLDDFVQSFGRKNAPIKSLLLDQSF
MSGIGNWMADEVLYQARIHPMQTSSKISKEKCKALHRCIKEVIEKSVEVGADSNEFPENW
IFHSREKKPGKAFVDGKKIDFVTVGGRTSAYVPELQILDGADAAAANRSKKGRDKAEENV
GKTSKKGQKAAPKEGGKTAQKTSVDEEEEEDDKPAKQRAKGAKGPPKKAGNTRADDHEEG
GDEDEEAKPAKRGRKRPAKGPSKKEGCPSDNEDSLGKEETVVAAKRPQRKKR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtggaggcggcgcggctggcgctggaggagcactgcgtcggg
aagcggatcgtgcgctgctccgccgcggaggacaccaaggtcatcgacggcgtcgccccg
tcgcggctggaggcggcgctggtcgggaggaccatcgccgccgcgcgccgcaagggcaag
aacctatggctcgtgctggattcgccgccgtcgccctccttccagttcggaatggctgga
gctatttacatcaagggtgtggagctgagcaaatataaaaggtctgcagtgagcccaact
gaggaatggccttcaaagtactccaaactatttgttgaattggatgatggcttggagttc
tccttcactgataagaggcgttttgcaaaaatacggttgcttgacaacccagaagctgtc
cctccaatttctgaacttggaccagatgccctatgcgaaccaatgcagcttgatgatttt
gtacaatcttttggtagaaagaatgcgccaataaaatcccttttgcttgatcagagcttt
atgtcaggaatcggcaactggatggcagatgaggtgctttatcaggcaaggatccatcct
atgcaaacttcatcgaagatatccaaggagaagtgcaaggcactccatcggtgcatcaaa
gaggtgattgaaaaatccgttgaagttggtgctgacagcaacgaatttccagagaactgg
atatttcattctagggagaagaaacccggcaaggcctttgtagatgggaagaaaatcgac
tttgttacagtaggcggcaggacatcggcgtacgttccagagctgcagattctggatggg
gctgatgctgcagcagcaaacaggtcaaagaaaggcagagacaaggcagaggaaaatgtg
ggcaaaacatccaagaaaggccagaaggctgctccgaaggaaggggggaagacggcacag
aagacatctgttgatgaagaggaagaggaggacgataagccagcaaagcaaagagccaag
ggggcaaagggcccaccgaagaaagcgggtaatactcgtgctgatgatcacgaggagggc
ggagacgaagatgaagaggcgaagcccgccaagagggggaggaagcgaccagcaaagggc
ccatcgaagaaagaaggttgtccttcagacaatgaagactcgcttggcaaggaagagact
gtggtcgcggcaaagaggccgcagaggaagaagcggtga
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