Aegilops tauschii (wheat D): 109759470
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Entry
109759470 CDS
T04345
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ats03016
]
109759470
Enzymes [BR:
ats01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109759470
Transfer RNA biogenesis [BR:
ats03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109759470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
109759470
NCBI-ProteinID:
XP_020173882
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Position
2D:complement(386321311..386325215)
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AA seq
625 aa
AA seq
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MEDIEDVLGPAGFSGGGAPPGLRLPLSTVAVKPKRRSSKLVQTQPQPDARIPGTQTIYVK
TFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMSTLISKCKTA
NKPLVVAGCVPQGSRDLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYSIDSLVDRVKIVVSEGVREIWLS
SEDTGAYGRDIGTNLPNLLNAIVAELPADRSTMLRIGMTNPPFILEHLNEIASVLRHPCV
YTFLHVPVQSGSDAVLKAMNREYTVSEFRMVVDTLCELVPGMQIATDIICGFPGETDEDF
VETVNLIKEYQLPQVHISQFYPRPGTPAARMKKVPSIEVKKRSRELTSVFEAFSPYEGLK
GKVERIWITEIATDGVHLVGHTKGYIQVLVIAPDSMLGTSADAKITSVGRWSLFGEVIEG
TVAIKEAALEQNSAEVQVKNSPNRVEEAACSTNTCDSCACSGAESVAQQCTPQRCEGPSD
APTNCGDATRQETPQSTLVRRNVEGAGKTSGSDTEKSRGDDQQVNVITRGAVNIDRILWG
GLAVSFATTVAILVLLTCKIFYTSS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgaggacgtgctgggaccggccgggttttccggcggcggagctcctccc
gggctccgcctacccctctccactgtcgccgtcaagcccaagcgcaggtcgtccaagctc
gtgcagacgcagccccagcccgatgcccggatcccaggcacccagacgatatacgtcaag
acattcgggtgctcacataaccagagtgacagtgagtacatgtcggggcagctctcggcg
tttggatatgcaattactgaagagcctgaaggagctgatttgtggctaattaacacatgc
actgtgaaaaatccaagtcaatctgccatgtcaactctcatatcaaaatgcaagacggca
aacaagccactggttgtagctggctgtgtgccacaaggaagccgggatctgaaggagctt
gaaggtattagtataataggagtgcagcagatagatcgggttgttgaagtagttgaggaa
actttaaaagggcatgaggttcggttgttgagtcggaaaacactgccctcacttgattta
cccaaggttcgaaagaataaatttattgagatccttccaataaatgttgggtgtctaggt
gcttgcacttactgcaagacaaagcatgctcgtggtcatcttggaagctattctatagac
agcttggtagatcgtgtgaaaattgttgtctcagaaggtgttcgtgagatatggttgagc
agtgaagatactggtgcttatggtagggatatcggtacaaatcttccgaatctcttaaat
gcaattgttgctgagcttcctgcggacagaagcacaatgcttcgcatagggatgacaaat
cctcccttcatactggagcatttgaatgagatagctagtgttttgcgccatccttgtgtt
tatactttccttcatgttcctgtgcaatcaggaagtgatgctgttttaaaggcaatgaat
cgtgaatacactgtcagtgagttcagaatggtagttgatactctctgtgagcttgtcccg
ggcatgcaaattgccacggatattatttgtggctttcctggcgaaactgatgaagatttt
gttgaaacggttaaccttataaaagagtatcagttgcctcaagttcacatatcacagttt
tatcccagaccaggaacacctgctgctagaatgaagaaagtgcctagcattgaagtgaaa
aaacgaagccgtgaattgacctcagttttcgaagctttttcaccatacgaaggactgaaa
ggcaaagtggagaggatatggattaccgaaatagctaccgatggtgttcatttggttgga
cataccaaagggtatatccaggtccttgtcattgctccagatagtatgctaggaacatca
gctgatgcgaagatcacatctgtcggaagatggtctttatttggtgaagtgatagaagga
accgttgccataaaggaagcagcgcttgaacaaaattctgctgaagtgcaggtaaaaaac
agcccaaatcgtgtggaggaagccgcttgttctacaaacacctgcgattcctgtgcatgc
tcgggtgcagaaagcgtggcacaacaatgtactccacagcgatgtgaaggtccatctgat
gcaccgacaaattgtggtgatgctactcgtcaggaaacacctcaatctacgcttgtgaga
agaaatgtcgagggggcagggaaaacaagtggaagtgatacagaaaaatctagaggggac
gatcagcaggtaaatgtgattaccaggggagcagtaaacattgacaggattctttggggt
ggtctggccgtaagctttgccacaacagtggccatacttgtgctgcttacctgcaagatt
ttttacacgtcctcctaa
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