Aegilops tauschii (wheat D): 109759696
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Entry
109759696 CDS
T04345
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109759696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109759696
03012 Translation factors [BR:
ats03012
]
109759696
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109759696
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109759696
Translation factors [BR:
ats03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109759696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
BEX
AAA_19
ABC_tran
Rad17
NACHT
Motif
Other DBs
NCBI-GeneID:
109759696
NCBI-ProteinID:
XP_020174123
LinkDB
All DBs
Position
1:complement(214628795..214642616)
Genome browser
AA seq
1029 aa
AA seq
DB search
MLLHSSGCRGSLLFRSGFPFPATTTRRNLRALTTAAATPNMYRGGRGGGTNSQRGRGRGR
GGGGRGGRGGGGGGRGEQRWWDPQWRAERLRQMASEVEKVDEHEWWNTIGQLREGSQQEL
VVKKNFGRDGQNTLAHIAQRHGLYFNAYNKGKTLVFSKVPLPDYRADLDERHGSSQNEIK
MSNETERRVENLLSRAQSNNNASASTSTVSMRQSLPSTSTAVAESTTYVDKQKLSFQLRD
MQRSKKMMPSARSMQSFREKLPAFKAREEFLKAVAANQVLVISGETGCGKTTQLPQFILE
EEIDNLRGADCSIICTQPRRISAISVAARVGSERGEELGETVGYQIRLESKRSTQTRLLF
CTTGVLLRKLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLVLMSATI
NAELFSKYFGDAPIMHIPGFTFPVAELFLEDILEKTQYKIKSERDNFQGNSRKKRLASVK
NDPLADVFQDVDINKEYGNYSITTRQSLEAWSVTELDLSLVEGTIEYICRHEGEGAILVF
LTGWDEISKLLDKIKGNNLLGNSNKFLVLPLHGSMPTVNQREIFDRAPANMRKIVLATNI
AESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYR
LYPKVIHDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKSLQPPDPLSVKNAIEL
LKTIGALDDLEELTYLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVL
PIDRKEEADAVKRSFAGDSCSDHIALLKAFEAWKEAKRSGRERSFCWENFLSPMTLKMMD
DMRNQFFDLLSDIGFVSKTRGVKAYNHYGKDLEMVSAVLCAGLYPNVIQCKRRGKRTAFY
TKDVGKVDIHPSSVNAGVQQFPLPYLVYSEKVKTASIYVRDSTNISDYALLLFGGSLSPS
NTGEGIEMLAGYLHFSAPKRIIELIQRLRGELDKLLQRKIEEPALDIFSEGKGVVAAAIE
LLHSQNIYH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccactcttccggttgccgcggcagtctcctgttccgcagcggcttccccttc
ccggccaccaccacccgcagaaacctaagggcgctcacaaccgcagcagctactcccaac
atgtatcgcggcgggcgcggcggcggcaccaactcccagcgtggtcgcgggcgcgggcgc
ggcggcggaggcagaggaggccgtggcggcggcggcgggggccgtggtgagcagagatgg
tgggatccgcagtggcgcgccgagcggctgcggcagatggcctcagaggtggaaaaggtt
gatgagcatgagtggtggaatacgattgggcaattaagagaaggatctcagcaggagtta
gtagtcaagaagaatttcggacgtgatggacagaatacacttgcacatattgctcagaga
cacggcctttacttcaatgcatacaacaaagggaagacacttgtttttagcaaagtgcca
ctgcctgattaccgagcagatcttgatgagaggcatggatcatcacaaaacgagattaag
atgtccaatgagacagagagacgagtggaaaaccttttatccagggcacagtcaaataac
aatgcttctgctagcacatccactgtctcaatgaggcaatctttgcccagcacatccacg
gcagtagctgaatcaacaacatatgttgataaacagaagctaagttttcagcttagggat
atgcagagatcaaaaaagatgatgccaagtgctagatcaatgcagtctttcagggaaaaa
ttaccagcattcaaagcgagagaggagtttttgaaagcagtagcagctaatcaggttttg
gtcatatctggtgagacaggttgtggtaaaacaacacagcttccgcagttcatactagaa
gaggagatagataaccttcgtggtgctgattgcagcataatatgtactcaaccccgccgt
atatctgccatatcggttgcagcacgtgtaggatctgagagaggtgaagagcttggtgag
actgttggataccagattcgccttgaatcaaaacgttccacacaaacacgactgctcttc
tgcacgacaggagttttgcttagaaaactggttcaggagccagacttagttggtgtaagt
catttactagttgacgaaattcatgaacgtggcatgaatgaagattttctcatcatcatt
ttacgcgaccttctgccaaggcgtcctgaccttcgtcttgtattgatgagtgcaacaata
aatgctgaactattttccaaatactttggagatgccccaattatgcatattccgggtttc
acttttcctgttgccgagttatttctggaagatattttggaaaagacccaatacaaaatc
aagtctgaacgtgataattttcaaggaaattcaagaaaaaagagacttgcttcagttaag
aatgatccattggctgatgttttccaggatgtcgacattaataaggagtacggaaactat
agcattacaacaaggcagtcccttgaagcttggtctgtcactgaactggatttgagcctt
gtggaaggtacgattgagtatatctgtcgtcatgaaggagaaggtgcaatccttgtattc
cttactggttgggacgaaatttcaaaacttttggacaagattaaagggaataatctgctt
ggcaattccaataagttcctagttctcccactgcatggctctatgccaactgttaatcag
cgtgaaatttttgacagagcaccagctaatatgagaaaaattgttctggcaacaaatatt
gcagaaagcagtattacaatagatgatgttgtgtatgtaattgattgtggtaaagcgaag
gagacaagttatgatgccttgaataagctagcgtgccttctaccatcgtggatatcaaaa
gcctctgctcatcagaggcgaggccgtgcaggccgtgttcagccaggtgtttgctatagg
ttgtacccgaaagtcattcatgatgccatgcctcagtttcagctgcctgaaattcttagg
actccactgcaagaactgtgccttactatcaaaagcttacagcttggagcagtcgcttct
ttcttagccaagtcactgcaacccccagatccgctttctgttaagaatgcgattgagctt
ctgaaaaccattggagcgctggatgatttggaggagctcacttatttaggacgacatcta
tgtacactaccactggatccaaacattggaaagatgctgctcattggatccgtcttccag
tgcctggatcctgcattaacaatcgctgctgctcttgcttatcgtaatccatttgtgctc
ccaatagatagaaaagaagaagcagatgctgtcaaaagatcatttgctggtgactcctgc
agtgatcacattgcccttcttaaggcatttgaagcatggaaggaagcaaaacgcagtgga
agggagcgttctttctgttgggaaaattttctgtctcctatgaccctgaagatgatggat
gacatgcgaaatcaattttttgatctactttctgatattggatttgttagcaagacaaga
ggagtgaaggcatataaccattatggcaaggatctggagatggtttccgctgttttatgt
gctgggctttacccaaatgtcatacagtgcaaaagacggggcaagaggacagcattctac
accaaagatgtcggaaaggtggacattcacccatcatcagtcaatgcaggagtgcagcaa
ttcccattgccttatctggtttacagcgagaaggtgaaaactgctagcatttatgtgagg
gactccacaaacatatcagattatgctcttctactttttggtggttccttaagtccaagt
aacaccggagaaggcatcgagatgcttgcggggtatcttcatttctctgcaccaaagcgt
atcatagagttgatccagagattaagaggtgaattggacaaactccttcagaggaagatt
gaggaacctgcacttgacatcttttcggaagggaaaggggttgtggctgcggccatagaa
ctgttgcacagtcaaaacatttaccactag
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