Aegilops tauschii (wheat D): 109760800
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Entry
109760800 CDS
T04345
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109760800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109760800
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109760800
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
109760800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
109760800
NCBI-ProteinID:
XP_040252866
LinkDB
All DBs
Position
1:498307660..498311812
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AA seq
756 aa
AA seq
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MVVADATGGEEGARISPKGGQGEEDAEEQLCRICRLPAEAERPLRSPCACRGSIRFVHDE
CQLRWIAARGKPLCEVCNRGITTRLLYAADAPARLPVSEFIMGASDKLTGLLLLLVFVVC
VVPEFSIHLAALWAWHLALARSFAQARCLLSLRLSTASALALFALSVAFARRFAPFAVAP
FARWVARLETRRQGFRGFDGLQVLALLAVEAFLMVVIFDMALACILVFLPFSLGRIIHWC
ISCSIFSNVGEVNSYTSTGSALLIGYGLIISVGVTFPGLNTLWQYFRGERLMIAIFIRRL
HARFLRETADFTTLASILLSAFIMYPLFFGWLLDIFTSKMFGATMSQRLELLFAPSFASA
SLHCFIGHIFLNLRLWLSVTLHKILRLGACPCCHIHRNHIQEPFHKFYFKRALLYDVIFM
AVVIFVPVQIAGQLAPELFPLDINCAAEGLSLWQAPRNYANSISRVFIVWFLLKGTSTVT
YLESLVKKVTRYSYATNVVLTWSTVAIYSSAVLIFPISIGRALLLAITRMPVASGLESND
LLALVVGIGIILTIIAATRDSIAYMTCGRPRHLALKYSMIVFLWFIVIPFLNGLLVDLFL
ISPFVGPADDVSLSYTWALGFLFMRIWLKLVQQIRARPVLAYIIDERWVPTIVRWKADCL
SWEISMFWFLQEIFMPIATRLLAALGVPYVLAKGVFPRFGYSAAVNSAVYRFAWLGSLGS
CELCYLFKVLCVKLHDSIRDERYVIGKRLEDVPDDS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgccgacgccaccggaggcgaggaaggggcgaggatctccccgaagggaggc
caaggagaggaggatgcggaggagcagctgtgccgcatctgccgcctccccgccgaggcg
gagcggcccctgcggagcccatgcgcctgccgcggcagcatcaggttcgtccacgacgaa
tgccagctccggtggatcgccgcccgcggaaaacccctatgcgaggtatgcaaccgcggc
atcaccacccggcttctctacgccgcggacgcccccgcgaggctgcctgtttctgagttc
atcatgggggcgtccgacaagctcacgggtctgctgctgctgctcgtcttcgtcgtatgc
gttgtgccggagttttccattcacctcgccgccctctgggcttggcacctcgcgctcgcc
agatcctttgctcaagcgcgctgtttgctctccctccgcctttctaccgcctccgccctc
gctttatttgcgctctccgttgcattcgcacgccggtttgctccatttgctgtagctcca
tttgcacgatgggttgcgcgcctagaaactcggcgtcaggggtttcgaggatttgatggc
ttgcaagtccttgcgctacttgccgttgaagcattcttgatggtggtaatatttgacatg
gctcttgcttgtattttggtttttctcccattctcgctgggaaggataatccactggtgc
atatcgtgttccattttttccaatgtgggtgaagtcaactcctacacttcaacaggctct
gcccttctaattggatatggacttatcatttctgtgggtgtcacttttcctgggctgaac
actctctggcaatactttaggggggagcgccttatgattgcaattttcattagacggctc
catgctagattcctcagagagactgcagatttcaccactcttgcaagtattctcctgagc
gcatttataatgtacccgttgttctttggctggttgcttgatatcttcacttcaaaaatg
tttggtgcaacaatgtctcaaaggctggaactcctgtttgctccatcttttgcttcagct
tctcttcattgttttattggacacatatttttgaatctacgtctctggttgtccgtaact
cttcacaagatattgaggctgggtgcctgtccctgctgccacatccaccgtaaccatatt
caggaaccattccacaaattttattttaagcgtgctcttctgtatgacgttatctttatg
gccgtagtaatttttgttcctgttcaaattgctggccaattggcaccggagctgttcccg
ttagatatcaattgtgctgctgaaggcttatcattatggcaagcgccacgaaactatgcc
aattcaatttctcgtgttttcattgtgtggtttctccttaagggcacttctacagtcaca
taccttgagtcgctagtgaagaaggtaactcggtattcgtatgccactaatgtggtgctt
acatggtcgactgttgcgatatacagttcagctgtgctcatttttccaatctcaattggg
cgtgccttgttgcttgccatcacccggatgccagtagcaagtggattggaatccaatgat
ctgcttgctttggttgttgggattggcatcatattaactattattgctgccactagagat
tcaattgcctacatgacttgtgggagaccacgccatctagctttgaagtactcaatgatt
gtgttcttatggtttatcgtcattccattcctgaatgggttgctggttgatttatttcta
atatcaccattcgttgggcctgctgacgacgtttcattatcctacacttgggcccttggg
tttctatttatgagaatctggctaaagctggttcagcagataagggccagacccgtcctt
gcctatatcattgatgaaaggtgggttccgacgattgttcggtggaaggccgattgtctt
tcttgggagatatcaatgttctggttcttgcaagaaatcttcatgcctattgccacgagg
ctactcgctgctctaggcgttccttatgtgctcgccaagggtgtcttcccgagatttggc
tactccgctgctgtgaactcagcagtctatcgcttcgcatggctgggcagcctcggctcc
tgtgagctctgctatctcttcaaggtgttgtgtgtcaaactccatgattcgatcagggac
gagcgctacgtcatcgggaagaggttggaagatgtccccgacgatagctga
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