Aegilops tauschii (wheat D): 109761713
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Entry
109761713 CDS
T04345
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109761713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109761713
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109761713
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF4298
Motif
Other DBs
NCBI-GeneID:
109761713
NCBI-ProteinID:
XP_020176133
LinkDB
All DBs
Position
5D:571550382..571552929
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AA seq
238 aa
AA seq
DB search
MEGGRAGGRKANQLRAYSCTRNPLERAHGSARWAQGDTVVLAAVYGPRPGTRKGENPEKA
SVEVVWKPKTGQIGRQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVMGDDGSLLPCAI
NASCAALVFAGVPMKHLAVAIGCGVLADGAVILDTSKAEEQQLKSFAHLVFPNSSKSVDV
KESQQKDGQPERGLITSITHGVMSEDDYFNCIERGLAASARISDFMRTTLQKHTPDYL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggagggggggcgggcgggagggaggaaggcgaaccagctgcgggcctactcgtgcacg
cggaacccgctggagcgggcgcacgggtcggcgcggtgggcgcagggcgacacggtggtg
ctggcggcggtgtacgggccccggccggggacccgcaagggggagaaccccgagaaggcc
tccgtcgaggtcgtctggaagcccaagacgggccagatcgggaggcaggagaaggagtac
gagatgacgctcaagcggacgctgcagagcatctgcctgctcactgttcatcccaacacc
accacctctgtcattcttcaggttatgggtgacgatggttctcttcttccatgtgcaatt
aatgcttcctgtgctgcccttgtttttgctggcgtccccatgaaacatcttgctgttgca
attggctgcggagtgttggccgatggtgctgtgattttggacacaagcaaggcagaagag
cagcaattgaaatcgtttgctcacctggtgttccccaattcaagcaagtctgttgatgtg
aaagaatcacaacagaaagatgggcagccagaacggggcctgataacttccatcacccat
ggagtgatgtccgaggacgattacttcaactgtatagagaggggtcttgccgcatccgcg
cggatctcggatttcatgaggaccaccttgcagaagcacacacctgactacctttga
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