Aegilops tauschii (wheat D): 109762456
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Entry
109762456 CDS
T04345
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109762456
09124 Replication and repair
03420 Nucleotide excision repair
109762456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109762456
03400 DNA repair and recombination proteins [BR:
ats03400
]
109762456
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109762456
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109762456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
109762456
NCBI-ProteinID:
XP_020176908
UniProt:
A0A453N3I5
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All DBs
Position
6:complement(58147511..58152028)
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AA seq
292 aa
AA seq
DB search
MTSAHSKLYSDDVSLVVVVVDTNPFFWAGAALPFADFLSHLIHFVNSLLLLSNLNHVVII
AAGVSSCAYVFDSGNAGASGAADVAETLGKASRKMEEFIKQDARETASNGTVADGGAASL
FSGALSLALCYIQRIFRSGTRHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRSMVPIDTC
IVGTQDSAFLQQASYITGGVYMKPQELSGLFQYLAAVFATDLHSRTFLRLPKTLGVDFRA
SCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSEFSRVSMPDLNSLPDQRQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggcgcactccaagctctactccgatgacgtcagcctcgtcgtggtggtcgtc
gacaccaaccccttcttctgggccggcgccgcgctccccttcgccgacttcttgtcccac
ctgatccacttcgtgaactcgctcctgctgctgagcaacctcaaccacgtggtcatcatc
gccgcgggtgtcagctcctgcgcctacgtcttcgactcgggcaatgctggtgcctccggc
gcggcagatgttgctgaaaccttaggcaaggcgagccgcaagatggaggagttcattaag
caggatgcccgtgagactgccagcaatggcaccgttgctgatggcggtgcggcgtcgctg
ttttctggcgcgctgtcccttgctctgtgctatatacagaggatttttcggtctggcact
cggcatccgcaacccaggattttgtgcctgcagggttctccagacggacctgaacaatat
gtggcagtgatgaattcaatattttcggcacagcgttcaatggttccaatcgatacatgt
atcgtggggacacaagactctgctttcttgcagcaggcttcatatataacaggaggagtt
tatatgaagccccaagaactaagtggtctatttcagtaccttgctgctgtatttgcaacg
gacttgcactcgagaacttttctgcgcctccctaagaccctgggagtggatttccgtgcc
tcatgtttctgccacaagaagactattgacatgggatatgtttgttcagtttgcttgtca
atattttgcaagtaccataagaaatgttcaacctgtgggtcagaattcagccgtgtcagc
atgccggatttgaattccttgccagatcaaaggcagtag
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