Aegilops tauschii (wheat D): 109762796
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Entry
109762796 CDS
T04345
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109762796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109762796
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109762796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
109762796
NCBI-ProteinID:
XP_020177260
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MDRDRSSRRDRGEDRHTTHERSDDHHRRRRHDSDGHQHHHKRDAEDEHRRRRHDDGGVEE
DRRRARRHRSHSPSESPPTAKRDRSSSRAPRDSVERRDSADREPLPPPSRKRKDHDSGGG
GRRDGDEPDREGGKRPRASVEPPPRKEERPRRERRRFEDVDAYGDERGKGDKGSQSGANG
DSQSGAATNGGAQQPLNSAPAVAVPSANPVSSKVSSITTTNENGGVSIRSDEVTGKSSTD
GTANSSAGRSSNLSLDALAKAKKALQLKKELSEKLKRLPALNKLGTTIPDTQTPKKETQS
VSGSSASAVHAGASSELPASSVSAGISGLTNIPNLDAVKRAQELAAKMGFRQDPQFAPLI
NMFPGTSSELTIPQRPAKAPVLRLDAQGREIDENGNVISMTKPSNLSTLKVNINKQKKDA
FQIIKPDLESLAKATVHFDERMGINPTKLLRPKRPGFQFIEEGKLSRQAELQRIKNQFGE
AQAKELKVKQAQLAKAKVEVDMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSKILLSPTY
EDISLEKLNMDKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQ
EMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDRNIARKLT
PSERREKKERKLFDDPNTLGCIVCVYRIRDLSHPQTRFKVDVNAQENRLTGAAVITDGIS
VVVVEGGKKSIKRYNKLMLNRIDWAAAVGGEDDADEEPDKPVNSCVLVWQGSVVKPTFPR
FGVHQCRSEAAAKKVFADAKVPHYWDLAVNFSEDSS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgaccgatcttctcgccgcgaccgcggcgaggaccgccacaccacccacgag
cgctcggatgaccaccaccgacgccgccgccacgacagcgacggccatcagcaccaccac
aagcgcgacgccgaagacgaacaccgccgtcgtcgccacgacgacggtggtgtcgaggaa
gaccgccgccgtgctcgccgacaccgttcgcattccccctccgagtccccgccgactgcg
aagcgggatcggtcgtcgagccgcgcgccccgggattccgtcgagcgccgcgattcggcc
gaccgcgagccgctgccgccgccgtctcggaaacggaaggaccacgacagcggtggcggc
ggccgccgcgacggcgacgagcccgaccgtgaaggcgggaaacggccgagggcctcagtg
gagcctcctccgcggaaggaggaaaggccaaggcgagagcgtaggaggtttgaggatgtt
gatgcgtatggtgatgagaggggtaagggggacaagggcagtcagtctggtgctaatgga
gattcacagagcggtgcagccactaatggtggtgctcagcagccgctcaattctgcacct
gctgttgcggtgccatctgctaatcctgtttcttcaaaggtatcttcgatcactaccacc
aatgaaaatgggggagttagtattagatctgatgaagttactggaaaatctagtacagat
ggaactgcaaattcatccgctggcagaagtagtaacttaagtcttgatgctttagcgaaa
gctaaaaaagctttgcaactgaagaaggaattatcagaaaaactcaagagattacctgcg
cttaataaactcggcactactattcctgatacacaaactcctaagaaagaaacacagtct
gtttctggctcgagtgcttctgcagtccatgcgggtgcatcttctgaactgcctgctagt
agtgtctctgctggcatttcagggcttaccaacattcccaatttggatgctgtgaagcga
gcacaagagcttgctgctaagatgggatttcgccaggatccacagtttgcacctcttatc
aacatgttccctggtacatccagtgaactgactattcctcaaagacctgccaaggctcct
gttcttcgtcttgatgctcaaggtagggaaattgatgagaatggaaatgttattagcatg
accaagccaagcaacctgagtactctaaaggtcaacattaacaagcagaagaaggatgct
ttccagattatcaaaccagacttggagtcgcttgcaaaagctactgttcatttcgatgaa
aggatgggcatcaacccaactaagctccttcgtcctaaaaggccaggattccagtttatt
gaggaaggcaaactttcgaggcaggctgaactgcagaggattaagaatcaatttggcgaa
gcacaagccaaagagcttaaagtaaagcaagctcaacttgctaaggcaaaagtcgaggta
gacatgaacccaaatctaattgaaattgctcctggtggaaggcctccaaagcaaaagcag
aaggaagagattcctgacattgagccatgggactcgaaaattctgctatctcctacttac
gaggacatctccttggaaaagcttaatatggataagatcaccatctatgtggaacatcca
gaaccattggaaccaccggctgagcctgcgccaccaccgcctcagccacttaagctgact
aagaaggagcagaagaagctcagaacacagaggcgcctcgctaaggaaaaagataggcaa
gaaatgattaggcaaggcctcttggagccaccaaagcccaaggtcaagatgagcaacctt
atgaaagtacttggtgcagaagctacacaggatccgacacgtatggagatggaaatccga
actgctgctgcagagcgtgagcaggctcacgtggaccgcaacattgcccgcaaactcaca
ccatcagaacgccgtgagaagaaagagaggaagctttttgatgatcccaacacactaggc
tgtattgtttgtgtgtacagaatcagagacctgtcgcacccccagacccgcttcaaagtg
gacgtgaatgcccaagagaaccggctgactggtgcggcggttatcacagatggtataagt
gttgtggttgtggaaggagggaagaagtcgatcaagaggtacaataagctgatgctgaac
cggattgactgggctgctgcagttggtggtgaggatgatgccgacgaggaaccagacaag
ccggtgaatagctgcgtgttagtctggcagggtagcgtggtgaagcccacctttccgagg
ttcggtgtgcatcagtgtcggagcgaggctgctgccaagaaggtgtttgcagatgctaaa
gttccacactactgggacctggctgtcaacttttcggaagattcgtcttga
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