Aegilops tauschii (wheat D): 109763000
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Entry
109763000 CDS
T04345
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109763000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109763000
Spliceosome [BR:
ats03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109763000
Complex C
U5 SnRNP specific factors
109763000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
109763000
NCBI-ProteinID:
XP_020177462
UniProt:
A0A453KQ35
LinkDB
All DBs
Position
5:complement(319008801..319019945)
Genome browser
AA seq
2358 aa
AA seq
DB search
MWNGAPPPPPMAAAPPPPGTVGAVPAPPPQSAAPPQAGQPLTPAELEAQLVEKARKWHQL
NSKRYGDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVY
KLLENMPMPWEQVRDVKILYHITGAITFVNEIPWVVEPIYLAQWGSMWIMMRREKRDRRH
FKRMRFPPFDDEEPPLDYADNLLDVEPLEAIQLELDPEEDGAVYKWFYDHKPLVKTKLIN
GPSYRKWHLSLPIMATLYRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEP
LYRDMEKGDEDWNEFNDINKLIIRQPLRTEYRIAFPHLYNNRPRKVRLCIYHTPMIMYIK
TEDPDLPAFYYDPLINPITSTSKIDRCEKKASEEEDEDDFSLPDGVDPLLKETPLYTDTT
AAGISLLFAPKPFNMRSGRTRRAEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKCYVLNE
LHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHL
DYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGL
QYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWL
FFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMP
EGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNR
ERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLE
SRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEAL
SRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPN
WVKPADSEPPPLLVYKWCQGINNLQDIWDTSDGQCVVMLQTKFEKFFEKIDLTLLNRLLR
LVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRA
SEIAGPPQMPNEFLTYTDTKVETRHPIRLYSRYIDKVHIMFRFTHEEARDLIQRYLTEHP
DPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENGFVSVY
SKDNPNLLFSMSGFEVRILPKIRMTQEAFSNTKDGVWNLQNEQTKERTAIAFLRVDDEHM
KVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQT
RIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGM
SHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIP
RINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQA
LGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLW
WSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVL
DQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHRWQMSKPSLVSESKDVFDQKAS
NKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGN
WFPGSKPLLQQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQII
WFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLA
KWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACL
KIEKFGDLILKATEPQMVLYNIYDDWLKSISSYTAFSRLVLILRALHVNNEKAKMLLKPD
KTIVTEPHHIWPSLTDEQWLKVECALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEIA
PPSQQRQQIAEIEKQSRETPQLNAVTTRTTNVHGDELIITTTSPYEQAAFASKTDWRVRA
ISATNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICISDLRTQVAGFLYGLSPQDNP
QVKEIRCISIPPQHGTHQMVTLPANLPEHEFLADLEPLGWMHTQPNEAPQLSPQDLTSHA
KILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRSNKDNGSNPHGYLPTHYE
KVQMLLSDRFLGFYMVPDNAPWNYNFMGVKHDPLMKYSMKLGTPRDFYHEDHRPTHFLEF
SNIEEGEVAEGDREDTFS
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacggcgcgccgccgccgccgccgatggcggccgcgcctcctcctccgggcacg
gtcggcgctgttccggcccctcccccgcagtccgccgcgccgccgcaggcaggccagccg
ctcacgccggcagagctcgaggcgcagctcgtggagaaggcccgcaagtggcaccagctc
aactccaagcgctacggcgacaagcgcaagttcggctttgtcgaggcgcagaaggaggac
atgccccccgagcacgtgcgaaaaatcatcagggaccatggggacatgtcttcgaagaag
tacaggcatgacaagcgtgtttatcttggagcactcaagtttgtacctcatgccgtttac
aaactactggagaatatgccgatgccctgggaacaggttcgggatgttaagatcttgtac
catatcaccggtgccataaccttcgtaaatgagatcccgtgggtagttgagcccatttac
ctggcgcagtggggctcaatgtggatcatgatgcgaagggagaagagagataggcggcat
ttcaaaagaatgcgctttcctccatttgatgacgaggaacctccactggattatgctgat
aatttgttggatgttgaaccgttggaggctatacaattggagttggacccagaggaagat
ggagctgtgtataaatggttttatgatcacaagcctctggtgaagactaagcttataaac
ggccccagttacaggaaatggcatctatctcttcccatcatggcaacactctatcgcctg
gctggtcaacttttgtcagacttgattgaccggaattatttctatttgtttgacatggag
tctttctttactgccaaagcacttaacatgtgtatcccaggaggtccaaaatttgagcca
ctctaccgtgatatggagaaaggggatgaggactggaatgagtttaatgatatcaacaaa
ctcatcatccgtcaaccacttcggactgaatacagaattgcgttcccacacttgtacaat
aacaggccaaggaaagtgagactttgcatatatcatactcctatgataatgtatatcaag
acagaggatccagatttacctgcattttactatgatcctctgataaatccaatcacttca
accagcaagattgatcgctgtgagaagaaagcaagtgaagaggaagatgaagacgacttt
agtcttcccgatggagtggaccctcttttgaaagaaactccactctacactgatacgaca
gctgccggcatttcattactctttgccccaaagccttttaacatgagatctggtagaaca
cgccgtgctgaggacattcctcttgtatctgagtggttcaaagagcactgcccaccagca
tatccagttaaagtccgggtgagctaccagaagctgctgaagtgctatgtgctcaatgag
ctacaccataggccgcctaaagcacagaagaagaaacatctgttccgttctctgcaagca
acaaagttctttcaaactacagagcttgactgggcagaagctgggttgcaagtttgcaag
cagggctacaacatgctaaacttgttgattcacaggaagaatcttaactatcttcattta
gactacaatttcaacttgaagcctgtgaagactctcacaacaaaggagagaaagaaatct
cgttttggaaatgcattccacttgtgccgtgagattttgcgacttactaagctagttgtt
gatgcaaacatccaatttcgcttgggaaatgttgatgcctttcagttggccgatggtttg
caatacatattctcccatgttggtcagttgactggtatgtacagatacaagtatcgtctg
atgcggcaaattaggatgtgcaaagatctgaaacacttgatatattatcgttttaacact
ggtcctgttggaaaaggacctggctgtggattttgggctccaatgtggagagtgtggctg
tttttccttcgtggtattgtaccgttgcttgaaaggtggttaggtaatttgctggccagg
cagtttgaaggtcgccattcaaaaggagttgctaaaacagtaaccaagcaacgtgttgag
tcacacttcgacctggagcttcgagctgcagttatgcatgatgtccttgatgctatgcca
gagggcatcaagcaaaacaaggcccggactatactacagcatcttagtgaggcatggcgc
tgctggaaggcaaacatcccctggaaggtccctggcctgccggttcctattgaaaatatg
atacttcgttatgtgaagtccaaggctgattggtggacaaatgtcgctcactacaaccgt
gagcgtatccggcgtggtgctacagttgacaagactgtctgccgcaaaaatcttggaagg
ttaacacgtctgtggctgaaggcagaacaagagaggcagcacaattacttgaaagatggg
ccatatgtgacacctgaagaggcagttgctatttatacaaccacagttcattggctcgaa
tcaagaaagttctcaccgatcccttttcctccactctcatacaagcatgataccaaactt
cttatactggcactggaaagactaaaagagtcttatagtgtggctgtaaggttaaatcaa
ctgcaaagagaggaactgggtttaattgaacaagcatatgataatccgcatgaagctttg
tctaggataaaacggcatcttcttactcagcgtgcttttaaggaagttggcattgagttt
atggatctgtatagctacttgatcccggtatatgaaattgagcctcttgagaaaattact
gatgcataccttgaccaatacttgtggtatgagggggacaagcgccacctcttcccaaac
tgggtaaagcctgctgattcagagccacctcctctacttgtttacaaatggtgccaaggt
ataaacaatttgcaggacatatgggacacgagcgatgggcagtgtgttgtgatgctgcag
acaaaatttgagaagttctttgaaaaaattgatctgactctgttgaacaggcttctacgg
ttggtcctggaccataacattgctgactatgtcactgcaaagaacaatgttgtgttgtct
tataaggatatgagtcacacaaattcttatggtcttattcgaggtcttcagtttgcatcc
tttgttgtgcaatactacgggttggtgctggatctcctgcttcttggtttaactcgagct
agtgagattgcagggccaccacaaatgccaaatgagttccttacatatactgacacaaaa
gttgagacaaggcatcccatcaggctctattctcgatatattgacaaggtgcatataatg
ttccgattcactcatgaagaggcaagggatttaattcaacgttacttgacagagcatcct
gatcctaacaatgagaacatggtcggttacaataacaagaaatgttggcctagggatgca
agaatgaggctcatgaagcatgatgtaaatcttggaagaagtgtattttgggatatgaag
aaccgccttccaaggagcattactacattagaatgggagaatggcttcgtttctgtgtac
agcaaggataacccaaacctgctctttagcatgtctgggttcgaggtccgtattctgcca
aagatacgtatgactcaggaggcattcagcaacacaaaagatggtgtatggaatttacag
aatgagcagacaaaggagaggacagccattgcatttttgagggttgatgatgaacacatg
aaagtgtttgagaaccgtgtcaggcaaatccttatgtcatcagggtcaacaacatttacc
aagatagttaacaagtggaacactgctctcattggcctcatgacatatttccgtgaagcc
actgttcatacacaggaactattggatctgcttgtaaaatgtgaaaacaaaatccagact
cgtataaagattggcctgaactcaaagatgcctagcaggtttccaccagttattttttat
acaccgaaggaaattggaggtctgggcatgttgtcaatgggtcacattttgataccacag
agtgatctcaggtatagcaaacagacagatgttggtgtgacgcattttcgaagtggtatg
agtcatgaagaggatcagcttatccctaacttgtatcgctacatccaaccatgggagagt
gagttcattgattcacagcgcgtgtgggctgaatatgctttgaagaggcaggaagcacaa
tcacagaacagacgcttaacactggaggatctggaagattcctgggatagaggtatacct
cgtatcaacacgcttttccaaaaagaccgccacactttggcatatgacaaaggatggagg
gtcagaacagacttcaagcagtatcaagtgctgaaacaaaacccattctggtggacacat
cagcggcatgatggaaagctatggaacttaaacaactacagaactgacgtcatccaagca
ctcggaggtgtggaaggtatcctggaacataccttatttaaaggaacatatttccctacc
tgggagggtctgttctgggagaaggcttcaggttttgaggaatcaatgaagtacaaaaaa
ctgacaaatgcgcagcgttctgggcttaaccagatccccaatagaagatttaccctttgg
tggtcaccaaccattaatcgtgcaaatgtatatgttggtttccaggttcagctagatctg
acagggatattcatgcatggtaaaattccgaccctgaaaatctctctgatccagattttc
cgtgcacatctttggcagaaggtccatgaaagtgttgttatggatctttgccaagttctg
gatcaggagttggatgcgttggagattgagacagtacagaaagaaacaatacatcccagg
aagagttacaagatgaacagttcctgtgcagatgtcctcctttttgctgcacacaggtgg
cagatgtctaaaccaagcttagtttctgagtcaaaggatgtcttcgatcagaaagcaagt
aacaagtattggattgatgtgcaattacgatggggagactacgactcacatgacatagaa
cgttacacaagggctaaatttatggattatacaacagataatatgtccatctacccttct
ccgactggggtgatgattggacttgatctagcatataatctgcactctgctttcggtaac
tggttccctgggtcaaagcctctcctccagcaagcaatgaacaagatcatgaagtcaaat
cctgccctgtacgtgctgagggagcgaataaggaagggtctccagttgtattcatctgaa
cccactgagccatatctgtcttcacagaactatggagagatattcagcaaccaaatcata
tggtttgtggatgacacaaatgtctatcgtgttaccattcacaaaaccttcgagggtaac
ctgaccaccaaaccaataaatggtgcaatctttattttcaatccaaggactggtcaacta
tttctgaaggtcatccacacaagtgtatgggcaggacaaaagcgtctagggcagctggct
aagtggaaaacagctgaggaggttgctgccttagttcgatctcttcctgtggaagagcag
ccaaagcaaattattgtgacaaggaagggtatgttggatccgttggaagtccatctgctt
gacttccctaacattgttattaagggtagtgagttgcagctgccattccaagcttgcttg
aagattgagaaattcggtgatcttattctcaaggctacagaacctcagatggttctttat
aacatatacgatgattggctgaaaagtatctcatcctacactgcattctctcgtcttgtg
cttatattgcgagcactacatgtcaataacgagaaggctaagatgttactgaagcctgac
aagacaattgttacggaaccacatcatatctggccaagtttgactgatgagcagtggctc
aaggtcgaatgtgcgctcagggatctcattctttctgattatgcaaagaaaaacaacgtt
aatacttctgcacttacacaatctgagattcgtgatataatacttggtgctgaaatagcc
ccaccatcacagcagaggcaacagatagctgagattgagaaacagtcccgagagacacct
cagttaaatgcagttacaacaaggacaaccaatgtgcatggcgatgaactcattatcacg
acaaccagtccatacgagcaagcagcatttgcatcgaaaacagactggcgtgtcagggcc
atctctgctacaaacttatatctccgtgtcaaccacatttatgttaactcagatgatata
aaggagactggctatacttacatcatgcccaagaatatattgaagaagttcatatgcata
tcagatctacggacacaggttgcaggtttcctgtatggactgagtccacaggataatccc
caagtcaaggagattagatgcatatccattcccccacagcatggaactcaccagatggtg
actctcccagcgaatctaccagagcatgagttcctcgcggacttggagccattgggatgg
atgcatacccagccgaatgaagctcctcagctatcgcctcaggacttgacatcgcatgct
aagattttggagaacaacaagcagtgggatggtgagaagtgcatcattttgacatgcagc
ttcaccccaggatcgtgctcactgaccgcatacaaattgacaccaagcggttatgagtgg
ggccgtagcaacaaggacaatgggagcaacccacatggttatctcccaactcactacgag
aaggtccagatgcttctcagtgaccgcttcctcgggttctacatggttccggacaacgcg
ccctggaactacaacttcatgggagtcaagcacgacccattgatgaagtacagcatgaag
ctggggacgccccgagacttctaccacgaggaccacaggccgacacacttcctggagttc
agcaacatcgaggagggtgaggttgctgagggggacagggaggacaccttctcgtag
DBGET
integrated database retrieval system
