Aegilops tauschii (wheat D): 109764175
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Entry
109764175 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109764175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109764175
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109764175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
109764175
NCBI-ProteinID:
XP_040242371
LinkDB
All DBs
Position
1:348098423..348105916
Genome browser
AA seq
1485 aa
AA seq
DB search
MDRAARRRARAGGGAPAAPSTRARRRDDAGTIVIDLDGEAPAAAAAASRRSSSSSSSAAA
MPVPLVGAVATRTRSRGLAIQPPAPEEAPRPKRRRKGATSADADGGGGSKGAGSSKSETR
PNRRGRPPRASVKSKEAEAEADAPACGDWVEVSRRYGCDDSARRGDDASGDDNGESRADE
ACGIGQGRDEHHSAASGNRINEHQGSGAVNGSNSCHAMNEVVSGDAAGLKGRGGEGGGLG
GGFHVDEEHMNEEDTVGCGDRELPTADAMMGDEAAASEDDFGDYYDDEMMEERLVADLIR
AYSNGGNLEASNGAYGDGGDLEEAEDEMGFTDDGDDDDSMHDADECGMSEPINDDAKAPN
NADAKAGTQDPVDHKVVAGEVRCHEEEEEDVIKDEVETKREGATGFNQGRSHIEILDSDE
EVKVLNDASKALKRKPLPRKKEPVVPCVAWRTRSLWGLKQDRLSYNAYFEELSDEPEEED
DSEVELDDEDDDSADDDNSASHDSEVELEEEDAKKKAKEEEEAEMRKHKKEIASSSAKIR
AGPLPLYTNTGKRIRKATPNSCNNSKRRRRIQTHHRIDSSDDEIIDHTVADGFKWEVHKK
PGIQPLNFDKDGSEGPVGNDITQHQKQTHFTWDLERRKRLKLETTTKERQLFERHLDSDS
SPSSSDQNKRHGDDSQTGKEKKHLSSKSGKSAKKSSRSGSKTLKRQSLLKLLMDKISGDK
DGGFSPFDQHPQFDYNFKDPHPLVFSFGTENSTPADIPEQNAKQNMLWGDFDFALESENI
GTYYDDEHQGESNVLDLGLPSKTPCSRGKHEFIIDDQIGIRCKYCSLVNLEIRFVLPSMV
SNYAEKTPWRNGSYLKEALMYHDLCEQAGSVDGQSQDFHLYGTVWDLIPGVITSMYQHQR
EAFEFMWTNLVGDIRLDELKHGAKPDVVGGCVICHAPGTGKTRLAIVFIQTYMKVFPDCR
PVIIAPRGMLFAWEEEFKKWDVNVPFHIMNTTDFSGKEDRDICRLIKKEHRTEKLTRLVK
LLSWNKGHGILGISYGLYMKLTSEKKSGCTEGNKVRTILLENPGLLVLDEGHTPRNERSI
MWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLTEKKVGRRHYVSKKRQ
DKFSDKYEKGVWASLTSNVTDDNAEKVRSILKPFVHIHNGTILRTLPGLRESVIVLKPPP
LQKSIIRKVENIGSGNNFEHEYVISLASTHPSLVTAINMSEEEASLIDKPMLERLRSNPY
EGVKTRFVIEVVRLCEALKEKVLIFSQFIQPLELIKEHLSKLFKWRVGKEILQMDGKIQP
RYRQTSIEVFNNPDSDAKVLLASTRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFR
IGQKKFVYTYNLITYGTGEGDKYDRQAEKDHLSKLVFSQEDEFNNVRNMLSKAEMDHCSK
LISQDKVLEEMASHDQLKGMFLKIHYPPTESNMVFTYNQIAPELS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgccgctcgccgccgcgcccgcgccggcggaggtgccccggcggcgccctcc
acacgcgcgcgccgccgcgacgacgccgggacgatcgtcatcgacctcgacggggaggcc
cctgcggccgctgctgccgcgagcaggcgctcttcttcctcctcctcctcggcggcggcg
atgcctgtgccgctggtgggggcggtggcgacgcggacgcgatcgagggggctggcgatc
cagccgccggcgccggaggaggcgccgaggcccaagaggaggaggaagggggcgacgagc
gcggatgccgacggcggcggtgggagcaagggcgcaggctcctccaagtcggaaacgaga
ccgaatcgccgagggcgccccccgcgggcctccgtgaagagcaaggaggcagaggcggag
gcggatgcgcccgcctgtggagactgggtggaggtgtcccggcgctatggctgtgacgac
agcgcgcggcgaggtgatgatgcttctggcgatgataatggcgaatctcgcgccgacgag
gcatgcggcattggccaggggagggatgagcatcacagtgccgctagtgggaatcgaatc
aatgagcatcaggggagtggggcggtcaatggttcgaattcgtgtcatgcgatgaatgag
gtggtatcaggcgatgcagcggggctgaaaggtcgtgggggcgaggggggtgggctaggt
ggtggttttcatgttgatgaggagcacatgaatgaagaggatacagtaggctgtggagac
agggagctgccgactgcggatgcgatgatgggtgacgaggccgcagcgtctgaagatgac
tttggagattactatgacgacgagatgatggaggaaagactggttgcagatctgatccgt
gcttacagtaatggtggtaatttggaggcaagtaatggtgcttacggcgatggtggcgat
ctggaggaagccgaggatgagatgggattcactgatgatggtgatgatgacgattctatg
catgatgcagatgaatgtggcatgtctgaaccaatcaacgacgatgctaaggcgccaaac
aacgctgatgctaaggcaggaacgcaggatccggtggatcacaaggttgttgctggtgag
gttaggtgccatgaggaggaggaagaagatgttatcaaggatgaggtggagactaagcga
gaaggagctacgggctttaatcaagggagatcgcatatagaaattcttgactctgacgag
gaagtaaaagtgctcaatgatgccagtaaggccttgaagaggaaaccgttgccgcgaaaa
aaggaacctgtcgtgccatgtgttgcatggaggactcgttcattatgggggcttaagcaa
gataggttgtcgtacaatgcgtattttgaggagttgtctgatgagccagaagaggaggat
gattcagaagtggaactggatgacgaggatgatgacagtgccgatgatgacaatagtgcc
agtcatgattcagaagtggaactggaagaagaggatgcaaaaaagaaagcaaaagaagaa
gaagaggccgaaatgagaaaacacaagaaagaaattgcctcatcttcggctaaaataagg
gccgggcctttgcctctttatacaaatacagggaagagaatacgaaaagcaaccccaaac
agctgcaacaactcaaagcgacggaggaggatacaaacccaccacagaattgactcatct
gatgatgagataattgatcatactgtagcagatggtttcaagtgggaggttcacaaaaaa
ccagggattcaaccactgaactttgataaagatggcagtgagggtccagtgggcaatgac
attacacagcatcagaagcagacacattttacttgggatcttgagaggaggaaaaggctg
aagcttgaaacgacgactaaggaacgtcaattgtttgagcggcatttggactcggattct
agcccatccagttcggatcagaataaaaggcatggcgatgatagccaaactgggaaggaa
aagaagcatttgtcatcaaaatctggaaaatctgccaagaaatccagccgttcaggttca
aaaacactaaagcgacagtcacttctgaagcttctgatggataagatcagtggcgataaa
gatggaggattctctccttttgaccagcatcctcagttcgactataatttcaaggatcct
catccattggtattctcatttggcactgaaaattccacaccagctgacataccagagcaa
aatgctaaacaaaatatgctgtggggtgactttgactttgctttagagtcagagaatatt
ggaacctactatgatgacgagcaccaaggagagagcaatgtgctagatcttggacttcct
tctaaaacaccttgttctcgagggaagcatgaatttattattgatgaccaaataggaatc
agatgcaaatactgctccttggtaaatctggaaatcagatttgttttaccatcaatggtc
tcaaattacgcagaaaaaactccttggcgaaatggatcttatttgaaggaagcgttgatg
tatcatgatctttgtgaacaagctggaagtgttgacgggcaatctcaagatttccatcta
tatggaacagtatgggatctcatccctggtgtcattactagtatgtatcagcatcaacgc
gaagcatttgaatttatgtggacaaatctagttggtgatattaggcttgatgagctgaag
catggagctaaacctgatgttgttggaggatgtgtgatctgtcatgccccagggacagga
aagacacgtttagcgattgtttttatccagacatatatgaaggtatttccagactgtcgg
ccagttattattgcacctcgcgggatgctgtttgcttgggaagaggagttcaaaaaatgg
gacgtcaatgttcctttccatataatgaacaccacagatttttcagggaaagaagacaga
gacatatgtaggctaataaagaaagagcatcggacagagaagttgacgaggcttgtaaaa
ctgctttcatggaacaagggtcatggtattcttggaataagttatggtctatatatgaaa
ctaacatcggaaaaaaaatctggctgcactgaagggaacaaagtaagaaccattcttctc
gagaatcctggtttgcttgtgctagatgaaggacacacacctaggaacgagcgcagtatt
atgtggaagacattgggaaaagttaaaactgagaagcgcataattctatcaggaactcct
ttccaaaacaattttcttgagctttataatatactctgtttggtaaggcctaggtttggt
gaaatgtttttgactgaaaaaaaagtgggcagaaggcactatgtctcaaagaagcgacag
gataagttttctgacaaatatgaaaaaggagtttgggcttcattaactagtaatgtaact
gatgataatgcagagaaagttcgatcaatactgaagccatttgttcatatccataatggc
accattcttcgaactcttccagggcttagagagagtgtgattgttctgaaacctcctcct
cttcagaagagtatcattagaaaggtggagaatattgggtctggtaataattttgaacat
gaatatgttatttccttagcttcgacacatccttctcttgtaactgccatcaacatgtcc
gaagaggaagcttcacttattgataagcctatgcttgagagattaaggtcaaatccctat
gaaggggttaaaacaagatttgtaattgaagtcgttcgtttgtgtgaagcactgaaagaa
aaggtattgatctttagtcaatttattcagccattagaattgataaaagaacaccttagc
aagcttttcaaatggagagtagggaaagagattctccaaatggatgggaagatccaacca
cgatatcgtcagacttcaattgaagttttcaataatccagatagtgatgcgaaggtgtta
cttgcatctacaagagcttgctgtgaagggattagcctaaccggagcttcaagagttgtt
cttctagatgtggtttggaatcctgctgtgggaaggcaagctatcagtagggcatttagg
ataggacagaagaaatttgtatatacatacaatttaataacttatggaacaggtgaaggt
gacaagtacgataggcaagcagaaaaggaccatttgtccaagttggtcttctctcaagag
gatgagttcaataatgtcaggaacatgctatcaaaagctgaaatggatcactgttctaag
ttgatatctcaggataaggttctagaggagatggcctcccatgaccagctaaagggcatg
ttcttaaagatacactatccaccaactgagtcaaacatggttttcacttacaaccagatt
gcccctgagttgagttaa
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