Aegilops tauschii (wheat D): 109764278
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Entry
109764278 CDS
T04345
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03022
Basal transcription factors
ats03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109764278
09124 Replication and repair
03420 Nucleotide excision repair
109764278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ats03021
]
109764278
03036 Chromosome and associated proteins [BR:
ats03036
]
109764278
03400 DNA repair and recombination proteins [BR:
ats03400
]
109764278
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109764278
Transcription machinery [BR:
ats03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109764278
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109764278
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109764278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
NAMPT_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
109764278
NCBI-ProteinID:
XP_020178717
LinkDB
All DBs
Position
1D:complement(78038134..78043972)
Genome browser
AA seq
758 aa
AA seq
DB search
MKFDLEGLTVHFPYAAIYPEQHAYMGELKRALDARGHALLEMPTGTGKTAALISLITSYS
LANPSRPLRLLYCTRTVHEMEKTLAELRLLFSHLPPAASRSLLALGLSSRKNLCVHPQAS
ASAARDSVDTACRRLTASWVRDKAASDPESTPLCEFFESFDRAASAGDLASFMPPGVYTL
ADLRSLGRERRICPYFLARQMVKYANVVVYSYQYLLDPKVASIVSREMQKECVVVFDEAH
NIDNVCIEALSVSVRKQTLEGAERNLRRISQEIDRFKATDANRLRAEYNRLVDGLAQRGN
LPISDAWLANPSLPDDILKEAVPGNIRKAEHFLAVLKRLVRFLDGRLETENVENEMPVSF
VASIHSQAGIDQRMLRFCYDRLHSLLLTLEITDTDEFMHIQTICDFATLIGTYSRGFSII
IEPYDDRMPEVRDPVIQLSCHDASLAIQPVFDRFQTVVITSGTLSPIDLYPRLLNFNPVI
SRSFTMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVVRNYGRLLLEMASSVPDGIVC
FFVSYSYMDGIVNSWNEMGILQDIMQHKLVFIETPDVVETTLALDNYRKACDCGRGAVFF
SVARGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILRARLEYLRETFQIKEGDFLTFDAL
RQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLHDAHLNLSTDMALHTA
REFLRRMAQPYDKAGSGGKKTLLTEEDLQDMARDAMEM
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgatcttgaaggcctgacggtgcacttcccgtacgcggcgatctacccggag
cagcacgcgtacatgggcgagctcaagcgagccctggacgcgcgcggccacgcgctgctg
gagatgccgacgggcaccggcaagacggcggcgctcatctccctcatcacctcctactcc
ctcgccaacccctcccgcccgctccggctcctctactgcacccgcaccgtccacgagatg
gagaagaccctcgccgagctccgcctcctcttctcacacctcccgcccgccgcctcgcgc
tccctcctcgcgctcggcctctcctcccgcaagaacctctgcgtccacccccaggcctcc
gcctccgccgcccgcgattccgtcgacacagcctgccgccgcctgaccgcgtcctgggtc
cgcgacaaggccgcctccgacccggagtccacccctctctgcgaattcttcgagtcattc
gaccgggccgcttccgccggcgacctcgcctctttcatgccccctggggtctacactctt
gccgacctccgttcgctcggccgtgagcgccggatatgcccctacttcctcgccaggcag
atggtaaaatacgccaatgtggtggtctacagctaccagtacctgcttgaccccaaggtg
gccagcattgtgtcccgggagatgcagaaggaatgcgtggttgtgtttgatgaggcgcac
aacatcgataacgtctgcattgaggcgctgagcgtcagcgtccgcaagcagacactggaa
ggtgccgagcgaaacctgcggcgcatctcgcaagagatcgataggttcaaggccaccgat
gccaataggcttcgtgctgaatacaatagactggtggatggattggcacagaggggaaac
ctgccaatatccgatgcttggcttgcaaatccatccttgcctgatgacattttgaaggag
gctgtacctggaaatatcaggaaggctgaacattttcttgctgtcttgaagagacttgtg
agattcttagatggacggcttgaaacagagaatgttgagaatgaaatgcctgtttccttt
gttgcttcaatccattcccaggctggaattgaccagagaatgctgaggttttgttatgac
cgcttacattctctattgcttacattggagataaccgacacggatgaattcatgcacatc
cagaccatttgtgactttgccactttgattggaacctactcacgtggtttctctataata
atagaaccctatgatgatagaatgcctgaagttcgtgatcccgtgattcagctgagttgc
catgacgcttcactcgcaatacagcctgtttttgatcgattccaaactgtcgtcatcact
tcaggaactctcagcccaatcgatctgtaccctcgtcttttgaattttaatcctgttata
agcaggagcttcacaatgtccctaacaagggattgtatatgtcccatggtgttgacacga
ggaagtgatcagctacctgtgagtacaaagtttgacatgcgcagtgatcctggtgttgtg
aggaattatggccgcctcttgctagaaatggcttcttctgttcctgatggcatcgtctgt
ttctttgtcagttacagctatatggatggcattgtcaacagctggaatgaaatgggtatt
ttacaggacatcatgcagcacaagttggtattcattgaaacaccagatgttgttgaaaca
acattggcccttgacaattacagaaaagcatgcgattgtggaagaggtgctgtcttcttc
tcagttgccaggggcaaagttgctgaaggtattgattttgatcgacactatggcagactt
gtgatcatgtttggtgttcccttccagtacacactcagcaagatattgcgtgctaggttg
gagtacctaagagaaacttttcagataaaggagggtgactttctgacatttgacgcattg
aggcaagctgctcaatgtgttggccgtgtgattcgttctaaggcagattatggaatgatg
atatttgctgacaagagatacagtcggcatgataaacggtccaaactgccgggatggata
ctgtcacacttgcacgacgcgcacctgaatctgagcaccgatatggctctccatacagcc
cgtgagttcctccggaggatggcgcagccatacgacaaggctgggagcggcgggaagaag
acgctgttgacggaggaggacctgcaggacatggctcgggacgccatggagatgtga
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integrated database retrieval system
