KEGG   Aegilops tauschii (wheat D): 109764931
Entry
109764931         CDS       T04345                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03420  Nucleotide excision repair
ats04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109764931
  09124 Replication and repair
   03420 Nucleotide excision repair
    109764931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ats04121]
    109764931
   03400 DNA repair and recombination proteins [BR:ats03400]
    109764931
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ats04147]
    109764931
Ubiquitin system [BR:ats04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109764931
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109764931
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109764931
Exosome [BR:ats04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109764931
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 109764931
NCBI-ProteinID: XP_020179303
LinkDB
Position
5:505444062..505453346
AA seq 830 aa
MSHPHASAPKRPFSSSSPSPASPAPPHMKKAKLPASSSSSAGPTEKSGLHLDPAAAAAVR
GGGRTNGEEDVDMLLADQDELRAPNASAPGGGTANLFRKKATLPQPPATAATRKPLRIKI
GQPKLPKNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAGDLCLHKLGANLYERVKKE
CEIHISAKISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRGIALLLDVKYVKNVANLCS
VWDMGLQLFRKHISLSPEIEHKTVTGLLRLIESERLGEAIDKTLLSHLLKMFTDLGMYSE
TFEKPFLECTSEFYATEGVKYLQQSDIPDYLRHAESRLQEEHDRCILYLEANTRKPLIAT
TEKQLLQRHTSAIIEKGFTVLMEANRVTDLSRMYTLFQRVDAIEMLKQALSLYIRGTGQG
IIMDEEKDKDLVSFLLEFKASLDKILEESFAKNEAFSNTIKESFEHLINLRQNRPAELIA
KFLDEKLRAGNKGTSEEELEGILDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASID
AEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQARTKLPTGIEMSVHVLT
TGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKEL
AVSLFQSVVLMLFNDAQKLSFVDIKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDID
DKDEFVFNEDFSAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKT
LSHTLLITELFQQLKFPIKPADMKKRIESLIDREYLERDRSNPQIYNYLA
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgtctcacccccacgcctccgcccccaagcggcccttctcctcctcctcgccctccccc
gcctcccccgcgccgccgcacatgaagaaggccaagctccccgcctcctcctcctcctcc
gccgggcccaccgagaagagcgggctccacctcgacccggccgccgccgccgccgtcagg
ggcggtggccgcaccaacggcgaggaggatgtggatatgctgctcgccgaccaggacgag
ctccgcgctcccaacgcgtcggccccagggggtggcacggccaacctcttccggaagaag
gccacgctcccgcagcctcctgccaccgccgccacccgcaagcccctccgcatcaaaata
ggtcagccaaaattgcccaaaaactttgaggaagatacttgggcaattttgaaggatgcc
attacagccatatttctcaagcagaagctttcttgcgatgttgagaaactttatcaggct
gctggtgatctctgtctacacaagctaggggcaaatctatacgagcgagtcaagaaagaa
tgcgaaatacatatatcagcaaaaatctcagcattagtgggtcaaagtccagatctggtt
gtatttttgtcgttggtgcaaagaacatggcaagatttttgcgatcagatgttgattatc
cgtggtatcgctttacttcttgatgtaaaatatgtcaagaatgttgcaaatctttgttca
gtgtgggatatggggttgcagctgttccgcaagcatatatcattgtctccggagattgaa
cacaaaaccgtcactggtcttttaagattgattgagagcgagaggcttggtgaagcaata
gataagacattacttagtcatcttctgaagatgtttactgatcttggaatgtattctgag
acattcgaaaagcctttccttgaatgtacctctgagttttatgctactgaaggtgtcaaa
tatttgcagcagtctgatattccagattatctaaggcatgcggagtcaaggttgcaagaa
gaacatgataggtgcattctgtatttggaagctaacacgaggaagccacttatagcaact
acagaaaaacaattgctacagcgacacacatccgcaattattgagaagggatttacagtg
cttatggaagcaaatcgtgtaacggacctgtcgaggatgtacaccctttttcagagggtt
gatgccattgagatgctaaagcaagcacttagtttatatatccggggcacaggccagggc
attatcatggatgaagagaaagacaaggatttggtttcctttcttctggaatttaaggca
tcccttgataaaatattggaagaaagttttgccaaaaatgaggctttctccaatactata
aaggagtcattcgagcatcttatcaatctacgccagaatcgaccggctgaattgattgca
aagtttctcgatgagaaacttcgagctggaaataaaggtacttcagaagaagaattggag
ggaatactcgacaaagttttggttctgttccgatttatacaaggaaaagatgtatttgag
gcattctacaagaaggatctagctaagaggttgctgctgggaaagagcgcatcaatagat
gctgagaaatcaatgattacaaagcttaaaactgagtgcggaagtcaatttaccaacaaa
ctggaaggaatgttcaaggacattgaattatccaaagaaataaatgattctttcaagcaa
tcatctcaggcaaggacaaagcttccaactggcattgaaatgagtgtacatgtgcttaca
acaggctactggccgacatatccaccgatggatgtgaagctcccacatgaactcaatgtc
tatcaggatatatttaaagagttctatttgagcaagtacagtggaaggcgtctaatgtgg
cagaattctttgggtcattgtgtattaaaagtagagttccccaaaggtagaaaggaactt
gcagtgtcattatttcagagtgtagtcctgatgttgttcaacgatgctcaaaagctaagc
tttgtcgacataaaggagtcgactggtattgaggataaagaattgagaagaacactgcag
tcacttgcttgtggcaaagttagggttctccaaaagacaccaaaaggacgagatatagat
gataaggacgaattcgtatttaatgaagattttagtgctcccctttatcgcataaaggtg
aatgcaattcagatgaaggaaacagtagaagaaaacacaagcaccactgagagagtattt
caagatcgtcagtatcaggttgatgcagccatagttcgaattatgaagacgaggaaaact
ctcagccacacccttctaataactgagcttttccagcagctcaagttcccgattaagcca
gcggatatgaagaagagaatagagagcctaatcgacagggagtacctggagagagaccgg
agtaacccccagatatacaattatctggcttga

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