Aegilops tauschii (wheat D): 109764960
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Entry
109764960 CDS
T04345
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Module
ats_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109764960
Enzymes [BR:
ats01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109764960
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
NosD
Motif
Other DBs
NCBI-GeneID:
109764960
NCBI-ProteinID:
XP_020179351
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Position
1:complement(54798624..54800453)
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AA seq
411 aa
AA seq
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MPEAGKKRTIPEVGERVGRRRERDEATRQQKQASYGAVGDGQHDDTPAFREAWATACASP
QPATLVVPREKTYLVKQTTFSGKCRSPVTFRLDGTLVAPASRSAWPEENMRWWIMFRNVD
GLTVTGDGTIDGNGETWWKSSCRVDKKLKCSNAPMALLLSRCNNLTVENIRLLNSQQIHM
SVEDCRDVLLKGITITAPGDSPMNDGIHIARTKDIQVLDCDIKTGDDCMSIETGTENLYA
SRITCGPGHGISIGSLGNDNSEARVSNITIYKAHLSGTTNGARMKSWQGGKGYAKDVTFE
DITMEEVHNPIIIDQNYCTSADPANPKPCKKQTSAVEFSNIRFKNIRGTSATKEAIKLDC
SDTVPCRDILLQDVKLTFRDRGHKHKHTSATSLCNNAKLTGSGTNVDPKTC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggcggggaagaagcggacgattcctgaggtgggcgagcgtgtcggtcgtaga
cgagaaagagacgaagctacgagacagcaaaagcaagcgagctacggagccgtcggcgac
ggccaacacgacgacacgccggcgttccgggaagcatgggccaccgcttgcgcctcgcct
cagccggccaccctcgtggtccccagggagaagacgtacctcgtgaagcagaccaccttc
tcgggcaagtgcaggtcccccgtcaccttcaggctggacggcacgctggtggcgcccgcc
agccggtcggcatggcccgaggagaacatgaggtggtggatcatgtttcgcaacgtcgac
gggctcaccgtgaccggcgacgggaccatcgacggcaacggcgagacgtggtggaagagc
tcgtgccgtgtggacaagaagctcaagtgcagcaacgcccccatggcgctgctgctcagc
aggtgcaacaacctcacggtggagaacatccggctcctcaacagccagcagatccacatg
tcggtcgaggactgccgggacgtgctcctcaagggcatcaccatcaccgcccccggcgac
agccccatgaacgacggcatccacattgcgcgcaccaaggacatccaggtcctagattgc
gacattaaaacaggggacgactgcatgtccatcgagaccggaaccgaaaacctctacgct
tcaaggataacatgtggcccgggacacgggatcagcatcgggagcttaggcaacgacaac
tccgaggcccgagtctcaaacataacaatctacaaggcgcacctctccggcacgaccaac
ggcgcgcgcatgaagtcgtggcagggaggaaaagggtacgccaaggacgtcacgtttgag
gacataaccatggaggaggtccataaccccataatcattgaccagaactactgcacatcg
gccgatcccgccaaccctaagccctgcaagaaacaaacttcggcggtggagttcagcaac
attcggttcaagaacataaggggcacgagtgcgacgaaagaggctatcaagctggactgc
agcgacaccgtcccatgccgcgatatattgttgcaagacgtgaagcttacctttcgtgac
cgtgggcacaagcacaagcacacttccgcaacaagtctatgcaacaacgccaagctaacc
ggatctggcaccaatgtagatcccaagacctgctga
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