Aegilops tauschii (wheat D): 109766147
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Entry
109766147 CDS
T04345
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ats04131
]
109766147
Membrane trafficking [BR:
ats04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109766147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
109766147
NCBI-ProteinID:
XP_020180505
UniProt:
A0A453QBD2
LinkDB
All DBs
Position
7:complement(4934152..4943016)
Genome browser
AA seq
1647 aa
AA seq
DB search
MGSDSDDADFFDKLVDDDDDDAKAPPAAAASAHGPAAADEAAADLAALTLSDGDDEDGAG
GTGGAPESMAPQDAAEAPTDAADPPPPPPQTEAEVPAAPRGAEVLPGAPDAGVLPAAPDD
EVPAGLPEVKAVAAADPEGRSPGSGSGSGSSKGVRTTVKQVQWSLFGADISSSAEPDPFS
DLLADGAGDAFLGAQVSGFGASSVGAVDHSFYNGAGSSNASSQLGWGTGSGEFLADGGVG
EDAFFGVQGSAVGTAGSVGAADHSFFNGVDSNANSQSYMGAGVVESADHQNTSAQSDWTA
GAVDPSDPYPGWKWDVATGQWYQVDAIGAQGFADNGGAVAAFGSENVQQQQQHLGVSYLQ
NSSQAGLETITEEGSAAAASWGQDQSSAAAAEYPPNMLFYAEYPEHYYDTNTQQWFTLES
YQQSVLQAATPPSAVDAFAGAGHSVAHTGNTQASSFNQQNQWQHGSVANSMQPYTENQIS
QPAYTEPLKPSTNYGAAINTFVPNINTFVPSTSQYSGSGEGHQVSNKVFQPTSYQSAAHK
GFEPYKNNQSAINTFLPSTSQYNSSGEGYQVSNKGFQPTSYQTAAHKGFEPHKNNQNAIN
TFLPSTSQYSGGGEAHQVSNKGFEPTSHQSAHKGFEPYKINQSTSASHDSGSRGFEPSQG
HQGFKPFTNNQRSTGFVPSTSHQIAHKELEPPKDNQAHHVAHQSSSGHGYDYPNGFVEPQ
KGVPVTSMYQMQTQTDPATHMHLPNNYVSNENSMSFPQQLAPSQQLGYSHHEERSSAGHP
PHSLVAFGFGGKLVVMKETSSMTTNFDSGNQGNSRGTLSILNISEVVADKIDQQGIPNGS
ALSYFYALCRRPIPGPLAGGSAAAKDLNKWLDDIIGGYESSVSDFQGGDVQKLLISLLKI
SYQHYGKLRSPFGPDPSREGMDGPDTAVTALFSSCSSNSARMRDHCMKNIPSEKQIQATA
QEVQNLLVSGKRKDALQYAQEGQLWGPALILALQLGDQFYADTVKKMAYCHFKSGSPLRT
LCLLIAGQPADVFKPENPVDANYATLHTQQQPAEGTPVGMLNDWQQNLAIITANRTKADE
LVITHLGDCLWKERNEVAAAHSCYLVAELNIDPYSESARMCLLGADHLRCPRTFTSPEAI
QRTELYEYAKALGNSQYILLPFQPYKLIYAYMLAEVGKVSDSLKYCQASLKLLKSSGRAP
ELEAWKQLFSSLEERIRTHQQGGYGTNLAPAKLVGKIFSTFDKSLSRMMGTQPAPMPPLS
QGSSGDRDFYPVPQVTNPAPPVTNFVNSQSPMPMSSSTSEQFMSEIAENSDPDKKGAHSR
SVSAPDLKKKQGGGSDNAQSTSGSGSSRFGWLLQKTVGLVSKSSNQAKLGEENSFYYDEN
LKRWVERGAAIPAAVEPPLAPPPTKASFQNGVPDHNTSTGPPSGGGYTPNGFSEAKPPNP
SEPVSGMPPMPPSQNQFSARGRAGVRSRYVDTFNKGGGGNSFGGPSYNRPAMPSVNKLPA
ASFFVPTPAADASLQPTEPTADAHSETANQDGPSSSPAVESSFYASPPPPMQMQTGMQRH
PSMDNIMTPSGSGNGSFSKSRAASWSGTYSEQMSSTAASRSPDGQTMQSPPMMPGVRPSH
SRSHSNSSLNRFNSGGGFGEDLQEVEL
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgactccgacgacgccgacttcttcgacaagctcgtcgacgacgacgacgac
gacgccaaagcgccccccgccgccgctgcctccgcccatggccccgctgccgccgacgag
gccgccgcggacctcgcggccctcaccctgtccgacggcgacgacgaggacggtgccggc
ggcacgggaggggcgccggagtccatggcccctcaggacgcggctgaagccccgacagac
gccgcggatcctccacccccccctcctcagacagaggctgaagtcccggcggcgccccgt
ggcgctgaggtcctgcccggggcccctgatgccggggttctgcccgcggcccctgatgac
gaggttccggctgggctacccgaggtgaaggcggtggccgccgctgaccccgagggcagg
tcgccagggtcggggtccgggtcaggctcctccaagggcgtccgtaccacggtcaagcag
gtgcagtggagcctcttcggcgccgacatcagcagcagcgctgagccggatccgttcagc
gacctcctggcggacggcgccggcgacgcatttctcggagcgcaggtttcaggtttcggt
gccagcagtgtcggagccgtggatcacagcttctacaatggagcgggcagcagcaatgcc
agttcccagctgggctgggggactggttccggggaattcctggcggatggcggtgttggt
gaagacgcctttttcggagtgcagggttcagctgtagggactgctggtagcgttggggcg
gcggatcatagtttcttcaatggagtggacagcaatgccaattcacagtcgtatatgggt
gctggtgtcgtggagtctgcggatcatcagaacaccagtgcgcagtctgactggaccgcc
ggggctgtggacccctcggatccctaccctggctggaagtgggacgtggcaacagggcag
tggtatcaagtggatgctatcggtgctcaaggctttgctgataatggcggtgctgtagcg
gccttcgggagcgaaaatgttcagcagcagcagcagcacctcggtgtttcgtacctgcag
aactcttcacaggcagggttggagaccatcacggaggagggcagcgccgctgccgccagc
tggggccaggatcagagcagcgcagccgcagcggagtacccaccaaacatgctcttctat
gctgagtaccctgaacattactatgacaccaacactcagcagtggttcacgctcgagtca
tatcagcaaagtgtcttgcaagctgcaactccgccatcagcagtagatgcatttgctggg
gcaggtcacagtgtagctcatactgggaatactcaggcaagtagttttaatcagcagaac
caatggcagcatggttcggtagccaacagcatgcagccttataccgagaatcagattagt
cagccggcgtatactgagcctttgaagccctctacaaattatggagctgctatcaacaca
ttcgtgcctaatatcaacacattcgtgccttctacaagtcaatacagtggtagtggcgag
ggccaccaggttagtaacaaggttttccaacctaccagttatcagagtgctgctcacaag
ggttttgaaccgtataaaaacaatcaaagtgctatcaacacatttttgccttccacaagt
caatacaatagtagtggtgagggctaccaggttagtaacaagggtttccaacctaccagt
taccagactgctgctcataagggttttgaaccacataaaaacaatcaaaatgctatcaac
acatttttgccttctacaagccaatacagtggtggtggtgaggcccaccaggttagtaac
aagggtttcgaacctactagccatcagagtgctcacaagggttttgaaccgtataagatc
aatcaaagtacttctgctagccatgacagtgggtccaggggatttgagccttcacaaggt
caccaggggtttaaacctttcacaaataaccagagaagcacaggatttgtaccttctaca
agtcaccagattgcccacaaggaattagaacctccgaaagataatcaagctcaccatgta
gcacaccaatcttcatcaggccatggttatgactatccgaatggctttgttgagccacaa
aaaggtgttcctgtaacaagcatgtaccagatgcaaacacagactgatcctgccacacac
atgcatttaccaaataactatgtgagcaatgagaactccatgagctttcctcagcagcta
gctccatctcaacaactcggctactcccaccacgaggagaggtcgtcagctggacaccca
ccacattcgctggttgcgtttggatttggtgggaagcttgtagttatgaaagagaccagc
tcgatgactacaaactttgacagtggaaatcagggcaattctcgaggcacactgtcaatt
cttaatatatcggaggttgttgctgataaaattgatcaacaaggcatccctaatggcagt
gcacttagctacttctatgctttgtgtcgtcgacctattcctggcccccttgccggagga
agtgctgcagcaaaggacctgaataaatggcttgatgatattatcggaggctacgagtct
tctgtcagcgatttccaaggaggggatgttcagaagctgcttatatcgttgctgaaaata
tcatatcaacactatggaaaactccgttcaccctttgggcccgatccatcgcgtgagggt
atggatggcccagacactgcagtaacagcgcttttttcatcatgtagtagtaatagtgcc
cgtatgagagaccattgcatgaaaaatatcccctcagaaaagcagatacaggctactgct
caagaagttcaaaatcttttagtttctggtaaaaggaaagatgcgcttcagtatgcgcag
gaaggtcagctttggggacctgcactgatccttgctttacaacttggtgatcagttttat
gcggatactgtgaagaaaatggcttactgtcatttcaaatctggatcacctttgaggaca
ttgtgccttcttatcgctggacaaccagcagatgtttttaagcctgagaaccctgtcgat
gccaattatgccactttacatacgcagcaacagcctgcagagggtactcctgtgggcatg
ctgaatgactggcaacaaaatttggcaattataactgcaaacaggacaaaagcagatgag
cttgtaatcactcacctcggggattgcctttggaaagagagaaatgaggttgcagctgct
cattcatgctatttagttgctgagctaaatatcgatccatactctgaaagtgcaagaatg
tgtttactcggagcagaccatctgagatgtcctcgcacatttaccagccctgaagctata
cagagaacagagttgtatgaatatgcgaaagcccttggaaattctcagtatatcctcctg
ccatttcaaccatataagctgatatatgcatacatgcttgcggaggttgggaaggtctct
gattcactaaagtactgtcaagcatctttgaagctcctgaaatcctccggccgtgcgcct
gaactagaagcatggaagcaattgttttcatctctggaggagcggatacgcacccaccag
cagggtggttatggcacaaatcttgctcctgcaaagcttgttggaaagattttctcaaca
tttgataaatctttgtcccgcatgatgggtacacaacccgcaccaatgccgccattgtca
cagggctcttctggtgacagagatttctatcctgttcctcaagttacaaatcctgctcct
ccggttacaaactttgtaaatagtcagtcaccgatgcctatgtcatcttctacttcggag
cagtttatgagtgaaatagcagaaaatagcgaccctgacaagaaaggcgcacatagcaga
agtgtctctgcaccagacttaaagaaaaaacagggtggtggatcagataatgcacaaagc
acatcaggttcaggcagttcgcgattcggatggttgctgcagaaaacagtgggacttgtt
tcgaaatcttccaaccaggccaagttgggggaagagaacagtttctactatgatgagaac
ctgaagcggtgggtggagcgaggtgctgcgatccctgctgccgtggagcctcctcttgcc
ccacctccgacaaaagcctcgttccagaacggcgttccagatcacaacacctcgactggc
ccccccagcggcggaggttatactcctaatggattttcagaagcgaagcctccaaatcct
tccgagccggtttcagggatgccaccgatgccacctagccagaatcagttctcagcacgc
gggagggcgggtgttagatcaagatacgtcgacacattcaacaagggtggtggtggaaac
tccttcggagggccatcatacaacagaccggccatgccatcggtgaacaagctgcccgcc
gccagtttcttcgtcccaactccagccgcagatgcttcattgcagccgaccgagccaaca
gccgacgcgcacagcgaaaccgcaaaccaggacgggccatcgtcctcaccggcagttgag
tcctcattctacgcctccccgccacccccaatgcaaatgcaaacaggcatgcagcggcac
ccgagcatggacaacatcatgaccccctctggcagcggcaacggctccttctcgaagtca
cgggcagcatcatggagcgggacatactcggagcagatgagcagcaccgccgcctcgaga
tcgccggacgggcagaccatgcagtccccgccaatgatgcccggtgtgagaccttcccac
agccgctcccacagcaactcgtcccttaatcggttcaacagcggtggtgggttcggggag
gatctccaggaggtggagctctga
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