Aegilops tauschii (wheat D): 109767069
Help
Entry
109767069 CDS
T04345
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109767069
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109767069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF2917
Motif
Other DBs
NCBI-GeneID:
109767069
NCBI-ProteinID:
XP_020181419
LinkDB
All DBs
Position
5:complement(564908306..564909897)
Genome browser
AA seq
376 aa
AA seq
DB search
MGMAPKELLVSATLLFLLLQVATANLRHENVIDRCWRGQSNWANDRQRLAMCSVGFAGNM
SYEVTAYTVTDPSDDPVRPRPGTLRYGATLLPGKVWITFQPGSMHIRLAQPLFVKSFTVI
DGRGTDVHLAGGAGIVLYKVSNVVIHGLHVHHVRAQAPGQVVRPGGAVQNVDAGDGDAIR
LLSNSKVWIDHNTLSRCEDGLLDVTRSSTDVTISNNWFHDHDKVMLLGHEDQHVADRRMR
VTVAFNRFGPNVSQRMPRIRHGYAHVVNNLYDGWREYAIGGSMGPTVKSQGNLFIASTTD
SANVTRRMPVGDAAGEDWHWHSTGDSFENGAVFKQTGNRVRPNYNRDQAFPAASSSEVRS
LTKDAGALRCSAGAAC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggcacccaaggaactactcgtgtccgccaccctcctcttccttctcctccaa
gtcgccaccgcgaacctccggcacgagaacgtcatcgaccggtgctggcgcggccagagc
aactgggccaacgaccggcagcggctcgccatgtgctccgtcggcttcgccgggaacatg
agctacgaggtgaccgcgtacacggtcaccgacccgagcgacgaccccgtgcggccccga
cccggcacgctgcggtacggcgcgacgctgctgcctgggaaggtctggatcaccttccag
ccgggcagcatgcacatcaggctggcgcagccgctcttcgtcaagagcttcactgtgatc
gacggccggggcaccgacgtgcacctcgccgggggcgccggcatcgtgctctacaaggtg
agcaacgtggtcatccacgggctccacgtgcaccacgtgcgcgcgcaggccccgggacag
gtcgtccggcccggcggcgccgtgcagaacgtggacgccggcgacggcgacgccatccgg
ctgctgtccaactccaaggtgtggatcgaccacaacacgctatcgcgctgcgaggacggc
ctcctcgacgtgacgcgcagctccacggacgtgaccatctccaacaactggttccacgac
cacgacaaggtcatgctgctgggccacgaggaccagcacgtcgccgaccgccggatgcgg
gtcaccgtggcgttcaaccgcttcgggcccaatgtgagccagcgcatgccgaggatacgg
cacggctacgcccacgtcgtcaacaacttgtacgatgggtggagggaatacgccatcgga
ggaagcatggggccgactgtcaagagccagggcaacctgttcatcgcctccacaacggac
agcgccaatgtgacgagaaggatgcccgtcggagatgcagccggagaggactggcattgg
cactccactggggactcgtttgagaacggcgccgtcttcaagcagacgggcaacagggtg
cggccgaattacaacagggatcaggctttcccggcggcgagctccagcgaggtgagatcg
ctgaccaaggacgccggtgctctgaggtgctccgccggggccgcgtgctga
DBGET
integrated database retrieval system
