Aegilops tauschii (wheat D): 109767624
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Entry
109767624 CDS
T04345
Name
(RefSeq) THO complex subunit 4C
KO
K12881
THO complex subunit 4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109767624
09122 Translation
03013 Nucleocytoplasmic transport
109767624
03015 mRNA surveillance pathway
109767624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109767624
03041 Spliceosome [BR:
ats03041
]
109767624
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109767624
TREX complex
109767624
Spliceosome [BR:
ats03041
]
Complex C
Other components
EJC/TREX
109767624
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109767624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
109767624
NCBI-ProteinID:
XP_020181955
UniProt:
A0A453AF16
LinkDB
All DBs
Position
2:complement(30071970..30078484)
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AA seq
281 aa
AA seq
DB search
MSFYARRGGDRGSERFQGGGGRGGYAMRGRSGLPPRGPLGINARPSARIIAKSFSRTKDM
TWRPDLFSDSMAASGIETGTKLYISNLDYRVSNEDIKELFSEVGHLKRFAVHFDGYGRQN
GTAEVVFTRRSDAIAALKRYNNVLLDGKSMKIEVIGSDLGLSMTPRINVVGASNGRATRT
VVMTPETGRRGGGSSTRPLSNPTTRLNRGAFQAGRGAFQAGRGGGRGYAPSQAQFQGRGR
GRGQFRGRGRGRGRGRKGAEKSADDLDKDLESYHAEAMKTD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttatgcaagaagaggtggagataggggtagtgagcgttttcaaggaggagga
ggacgaggtggatatgccatgcgtgggagatcagggcttcctcctcgaggaccacttggg
attaacgctcgaccatctgcacgcattattgctaagtcttttagcagaaccaaagacatg
acctggagacctgatctatttagtgatagtatggcggctagtggaatcgaaactggtaca
aaattgtacatttcaaacttggactatcgtgtttccaatgaggatataaaggagctgttt
tcagaagttggtcatttgaaacgctttgctgttcactttgatggttatggtcgccaaaat
ggcacagcggaggtggtgtttacaaggaggagtgatgcaattgctgcattgaaacgttat
aataatgttctgcttgatggaaaatctatgaagattgaggttattggaagtgacctgggt
ttgtctatgacacctcgtataaatgttgtcggggcatctaatggtagagctacgagaacg
gttgttatgacgcctgaaacgggtcggcgtggtggtggttccagcactaggcctttgagt
aatcccaccaccaggttgaatcgtggtgcattccaagctggacgcggtgctttccaagcg
ggacgaggcggaggcaggggctatgctccgtcacaggcccagttccagggccgaggcagg
gggcgcggtcagttccggggccggggccggggccgcggtcggggcaggaagggggcagag
aaaagcgcagatgacctggacaaagacctggaatcctatcatgcggaggcaatgaagacc
gactga
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