Aegilops tauschii (wheat D): 109767641
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Entry
109767641 CDS
T04345
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109767641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109767641
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109767641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SAWADEE
Motif
Other DBs
NCBI-GeneID:
109767641
NCBI-ProteinID:
XP_040254949
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All DBs
Position
2:complement(44124055..44129205)
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AA seq
1256 aa
AA seq
DB search
MAEDTLKGGPKGRRSHPISETPFEAFYDGSWHGVNCIKVRDGGLFVIFIYSGSTVEHNVD
GEHLRLRSRRATYFDCSHVLKPGVDICVQSSHPLQGSPTGELKSLMLLSHDARLITIKRN
HIEDQCLCLFVIMLHKNQCPDNTENGEVISDRREQLVTLNNIFLLQKLQPKELHEGSVQW
SSAEDCLSHNRSKLLSARFSQEIAHLVVLSILNGMEFSIKLVEGNIIYRIIKGGRARCNL
DSMSTPPGFGNSMEIVSFQLRNEALCPIIRNIPVTHAKKRNLTEDAGFTMKAELDGQLED
RRFTVKTELDGLLDVFSYEQVDLRRSKRRKTQAERFTSYDTPNFGRDRWKRCDAPSTKHG
NSQRASRRDSPVAVESTYAEVPVNITRKQTSATAFVVKENPNSAEGKHKSTARITPVKEK
PSSMEVKEESTFEERSPGPHVPRTPAKSKEKNLCPPLSLRRKSFTSSRGLNGNSEPVFGR
KRKERICEREYKKMINQCIGNIQSEMERDFEFNLGVPMMNYDQGFYGEVNFTWPASSADN
DSQEEKDGLEEFWEEMDHSLTTLALEKNQDSHSEAVHEATAGLGKSEENPCDHDCMLDEG
LGLVCRLCNVVCVEIKHIFPQMANGNGYNKERPGCRNCDPDDLVLDPSLLAILGPEFSEL
RGSGNLWSLIPDLEPKLLPHQRNAFEFIWKNLAGSLQLEEMDNPTASTGGCVVAHTPGSG
KTLLLISFLVSYLKVHPRSRPLVLTPKSAIHTWMREFEKWGISLPLHVLHQVDKRGKPMG
PIDPRLQAILSNFRRPNWKNICLVDRLDKLCKWHEHPSVLLMTYSSFLRLAKQDSRMPQR
AFMAQVLINNPGLLILDEGHNPRSNKSKLRRVLMKVKTEFRILMSGTVFQNNFEEYFNTL
SLARPRFVDDVMTALVPERKKETRGRRAKHREAVARRIFVDRVGQMIESSDNWDRQGGIS
LLNKLTCGFIDSFEGSKLRSLPGIHVYTIFMKPTEIQEDILSRISMATSCGGRYLLEVEL
LITIASIHPWLIKTTKSSSTYFTPEEIHKVDRYKRDFAVGCKARFVIDLLHKSSYRGERV
LIFCHNVSPISFLVELIENVFGWRLGEEVLVLQGDQELPVRSDVMDKFNTDSQGKRKVLI
ASTTACAEGISLTGASRLVMLDSEWNHSKTRQAIARAFRPGQERTVYVYLLVASGTWEED
KYSRNRRKAWMAKMVFHGRYFDVPLRNAVTAIDDGLLKELADEDKTKTFHMIVKQD
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatacgctcaagggagggcctaaaggtcgccgtagtcatcccatcagtgaa
actccatttgaggcattttatgatggctcatggcatggagttaattgtataaaggtcagg
gatggcggtctgttcgttatatttatctactctggttccacagtcgagcataatgtggat
ggggaacatctgcgcctacgctccagaagagctacgtacttcgactgctcgcatgttctc
aagccaggtgttgatatctgtgtacaatcatctcatccactgcaaggaagtccaactggg
gaattgaaatctttgatgttactgtctcatgatgcaaggctcatcacaatcaaaagaaat
catattgaagatcagtgtctctgcttgtttgttattatgctccacaagaaccaatgtcct
gacaatacagaaaatggagaagtgatatctgatagaagagagcagctggtgaccctaaac
aatatcttcctcttgcaaaagctccaacctaaggagctccatgagggaagcgtacaatgg
agttctgcagaggactgcctctctcacaacagaagcaagctgttaagtgcaagattctcc
caagaaattgcacatctcgtagttttgtctatcctgaatggaatggagttcagcatcaag
ttggtagaaggaaacatcatctatagaatcatcaaaggaggccgagcgcgttgtaatctt
gattccatgagcacacctccaggctttggcaacagcatggagatagtttcattccaactg
cgcaatgaggctttatgtccaattatcagaaatatccctgtcactcatgcaaagaagcgc
aatctcacagaagacgcgggattcactatgaaggctgaactggatggtcaattggaagac
aggagatttacagtcaagactgagttggatggtcttttggatgttttctcgtatgaacaa
gtggatttgaggcgctcaaagcgtcggaaaactcaagcagagcgctttactagctatgat
acgcctaatttcggccgtgacaggtggaagagatgtgatgcaccttccaccaagcatggc
aattcacaaagagcttcacgtcgagattcaccagttgcagtagaatcaacctatgcagag
gtcccagtgaatatcacacggaaacaaacaagtgcaaccgctttcgtggtcaaggaaaac
ccaaactccgcagaagggaagcataagagcacagcaaggataactcctgttaaggaaaaa
cccagctctatggaagttaaggaggagagcacatttgaagaaagatctccgggtcctcat
gttccacggacacctgcaaagagtaaggagaagaatctttgcccccctttatctcttcgg
cggaagtcatttacttcatcacgcggcctaaatggcaattctgagccagtatttggtcgg
aaaaggaaggaacgcatatgcgaaagagaatacaagaaaatgataaaccaatgcatagga
aacatccagagtgaaatggagagggactttgagttcaatctaggtgttccgatgatgaat
tacgatcaaggtttttacggagaagtgaatttcacatggccagcttcttctgccgataat
gacagtcaagaagagaaagatggtcttgaggaattttgggaagaaatggaccactcattg
accacactagcgcttgagaaaaatcaggactcacattcagaagcagttcatgaagccact
gctggtttaggtaaaagtgaagaaaatccatgtgatcatgactgcatgctggatgagggg
cttggactggtgtgcagattatgtaatgttgtatgtgtggagataaagcatatctttccg
caaatggccaatggtaatggctataataaggagagacctggatgccgcaattgtgatcct
gatgatcttgtacttgatccttctcttcttgcaatcttgggaccagagttttcagaactg
aggggctccgggaacctgtggagtttaataccagatcttgagcctaaactacttcctcac
caaaggaatgcattcgaattcatttggaaaaacttggcgggatcgctgcaactcgaggaa
atggataatccaacagccagtacaggtggctgtgtggttgcacatactcctggatcaggg
aaaactctgctgctgatctcatttcttgtcagttacttgaaagttcacccgagaagccgg
ccgttggtgcttactccaaaatctgctatccatacatggatgagagaatttgagaaatgg
ggcatttcacttcctctgcatgtgcttcaccaggttgacaaaagaggcaagccaatgggg
cctattgatcctaggctgcaggcaattttaagcaattttcgccgcccgaactggaaaaat
atttgccttgtggatcggctggacaagttatgcaagtggcatgagcaccccagtgttctc
ctcatgacatactcatctttcttacggctggccaaacaagactcaagaatgccgcagcga
gcattcatggcgcaagtcctgatcaacaaccctgggctgttgatcctcgacgagggtcac
aacccaaggagcaacaaatccaagttgcggagggtgctgatgaaggtgaagactgagttt
agaatcctcatgtctggtacggtcttccagaataactttgaagagtatttcaacacccta
tctctggccagacctcggtttgtggacgatgttatgaccgcgcttgtcccggaaaggaag
aaggaaacgaggggcaggagagctaaacatagagaagcagtggcaaggcgcatcttcgtg
gacagagttgggcagatgattgagtccagcgacaactgggaccggcaaggtggtatcagc
ttgttaaacaagcttacatgtgggttcatcgattcattcgaagggtcaaagctaaggagc
cttccagggatacatgtatacacaattttcatgaaacccactgaaattcaggaggatata
ctttcaagaatatcgatggccacgtcatgcggtggccgttaccttctcgaggttgagctg
ctcatcaccattgcttctatccatccatggcttataaaaacaaccaaatcttctagcact
tacttcactccagaagaaattcataaagttgacaggtacaagagggactttgctgtcggt
tgcaaggcgaggtttgtcatcgacctgctgcacaagtcgtcgtacaggggggagagggtg
ctgatattctgccacaacgtgtccccgataagctttcttgtcgagttgatcgagaatgtg
ttcggatggcgcctcggggaggaagtcctggtgctccaaggtgatcaggagctgcctgtc
cgctccgacgtcatggataagtttaacaccgacagtcaaggtaagaggaaggtgctcatt
gcttcgacgacggcctgcgccgagggtatcagcttgacaggtgcatcaaggttggtcatg
ctggattcggagtggaaccactccaagaccaggcaggcgatcgcgcgggcgttcaggccc
ggccaggagaggaccgtgtatgtctacctgctggtggcatctggtacatgggaggaggac
aagtacagccgcaacaggaggaaggcttggatggccaagatggtcttccacggacgctat
ttcgacgttccgctacggaacgcggtgactgctatcgatgatggtcttctcaaggagctt
gctgatgaagataagaccaaaaccttccatatgatagttaagcaggactga
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