Aegilops tauschii (wheat D): 109767712
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Entry
109767712 CDS
T04345
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109767712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109767712
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109767712
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109767712
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Phage_T7_Gp5_9
Motif
Other DBs
NCBI-GeneID:
109767712
NCBI-ProteinID:
XP_020182022
LinkDB
All DBs
Position
3:529703599..529705277
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AA seq
312 aa
AA seq
DB search
MHRGRIAVNPAAGTFARFPPPPPRFKFNHMFPVQVQAPPFVYHAAPLPPVQPQLAVQVRP
VWAGNFNEEWGYLQSFAAFARYVAVDVHYPGLVHAAGQDLSSLTVEHCYALMKANVDGLK
PLQVGIAVCDHQGQQVAWEFNLRDFCRLADPHDDKALDYLARRGLDLDTLRNHGVDAYML
GALLMGSGLIGAGHGRPLSWITYAGAYHVAYLLKIVTGGAPLPHDVAGFLGAMQYYLGQQ
VYDVATMAAGCSGMPVGLDCIAANLRIHPPWGSPRLAGAAAVRALLAFRILKQGQFGGSV
ERFRGLLQGLQH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtggacgcatcgccgtgaacccggccgccggcacgttcgccaggtttccgccg
ccgccgccgcgcttcaagttcaatcacatgtttcccgtgcaggtgcaggccccgccgttt
gtctaccacgctgctcccctgccgccggtacagccgcagctggcggtccaggtgcgccct
gtgtgggcggggaacttcaacgaagagtggggctacctccagagcttcgccgcgttcgcc
cgctacgtcgctgtcgacgtgcactaccctggactcgtgcacgccgccggccaggacctc
agcagcctgacggtggagcactgctacgcgctcatgaaggcaaacgtcgacggcctcaag
ccgctccaggtcggcatcgccgtctgcgaccaccagggccagcaggtcgcctgggagttc
aacctccgcgacttctgccgcctcgccgacccgcacgacgacaaggccctcgactacctc
gcccgccgcggcctcgacctcgacacgctccgtaaccacggcgtcgacgcctacatgctc
ggcgcgctgctcatgggttccggcctcatcggcgccggacacgggcggccgctgtcgtgg
atcacctacgccggcgcctaccacgtggcgtacctcctgaagatcgtcacgggcggcgcc
ccgctgccgcacgacgtggccgggttcctcggcgccatgcagtattacctcggccagcag
gtctacgacgttgcgacgatggcggccggctgctcgggcatgccggtggggctggactgc
atcgccgctaacctgcgcatccatccgccgtgggggagccctcgcctagcaggcgccgcc
gccgtgcgcgcgcttttggccttcaggattttgaagcaagggcagttcggtggcagcgtg
gagaggttccgaggcctgcttcagggcctgcagcattag
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