Aegilops tauschii (wheat D): 109768520
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Entry
109768520 CDS
T04345
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03430
Mismatch repair
ats03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109768520
03460 Fanconi anemia pathway
109768520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109768520
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109768520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109768520
NCBI-ProteinID:
XP_020182841
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All DBs
Position
6:complement(290689356..290699885)
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AA seq
982 aa
AA seq
DB search
MGGASPAIKPIGKSVVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVGLKAYGEEWFK
VADNGSGISPGNFQALALKHHTSKISDFSDLNSVVTFGFRGEALSSLCALGKLTVETRTK
DELVGTHLEFEHSGVVISERKIARQVGTTVTIEKLFSTLPVRGKEFSRNIRKEYGKVISL
LHAYALIAKGVRLLCTNTVGKNSKMVVVKTQGSSSLKDNIITVFGLNTFKCLEPFNLALS
EGCQVEGFLSKPGPGTGRNSGDRQFFYVNGRPVDMPKVTKLVNELYRSSNSRQYPVAVLN
FCIPTTSYDVNVAPDKRKIFFSSEHTILLSLREAIENLYSPQQCSFSINHIEDPEKVNHT
EDPVKEDDPMIDEPIKSTYLMDKENVSSPENDNCKEDTDSDDQDPLKDQKVSSSATRAAT
GAASRDMSPLPRSPDTEVDRSPWFSALRYEQPKRPRADFKNNPVRENNVRTGLAAQSSPS
TIVQSSLMNFLSLNKRKHEDSCNLITEAPVLRRGTCSGQVRRTSLEANAPGISDANSLQQ
ISLWDHSPQPFVPKRTEVSLQHSEPPNVGSPGTEAPVLRRGTCSGQVRRTSLEANAPGIS
DANSLQQISLWDHSPQPFVPKRTEVPLKHSEPPNVGSPSTEAHLLNPCDVHSTEFDADEQ
NGRRLSNFGAPDQCLKDTEPPNTPSNITLLDGHDNDTSVCSTSVSYSVQFTIDKLRRRRK
RGFIVSHENRVHCSEKTARCYKAATLDNYVPNDDEGKSNYLAAATNELDRFFSKDNFGEM
KVVGQFNLGFIIGKLEQDLFIVDQHAADEKYNFESLSQSTTLNIQPLLQPLRLELSPEEE
VIVSMHMNTIRKNGFVLAEDLHASPGSHYLLKAVPFSKNITFGVQDVKELICMLSDSQGD
CSIISSYKMDKTDSVCPSRVRAMFASRACRMSTMIGDPLTKTEMKKILKNLTGLRSPWNC
PHGRPTMRHLADLTSIRFKEAN
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcctcgccggcgataaagcctatcggcaaatcagtggtgcaccggatttgc
tcgggccaagtcattttcgacctctcctccgcagtgaaggagctcgtggagaacagcctc
gacgccggcgccaccaccgtcgaggtcggcctcaaggcctacggcgaggagtggttcaag
gtcgccgataacggcagtggcatctcgcccggcaatttccaggcgctcgctctgaagcac
cacacgtccaagatatcggatttctccgatctcaactccgtggtcaccttcgggttccgg
ggggaggcgttgagctccctctgtgcattggggaaactgacggtcgagacaaggactaaa
gatgagttggtcggcacacatttggagtttgagcactcgggcgtggtgatcagtgagagg
aagattgcacggcaagtcgggaccaccgtaaccatcgagaaactcttctccaccttgccg
gttcggggcaaggagtttagtaggaatatcaggaaggagtacgggaaagtgatctccttg
ctacatgcttacgccttaattgccaaaggggtcagattactttgcacaaatactgtgggc
aagaattctaaaatggtggtggttaaaactcaaggaagcagttcactgaaggacaatatc
attacggtctttggtttgaacactttcaaatgcctggagcccttcaacctggccctctct
gaaggctgtcaggtagaaggtttcctttccaagcctggaccgggcactggtcgcaattca
ggagataggcaattcttctatgtaaatggcagacccgtggacatgccaaaggtcaccaaa
cttgttaatgaactgtacaggagttccaattccaggcaataccctgtggctgtcctaaat
ttttgcatcccaaccacatcttatgatgtgaatgtcgcacctgataagaggaaaattttc
ttctcatctgagcatactattttgttatctttacgggaggctattgaaaatctgtacagc
cctcaacagtgcagtttttccatcaatcacattgaagatcctgaaaaggtcaatcacact
gaagatcctgtaaaggaagatgaccctatgattgatgaacctattaaaagcacatattta
atggacaaggaaaatgtttcatcgcctgaaaatgataactgcaaggaagacacagatagt
gatgatcaggacccactgaaggatcagaaagtgagttcttctgcgacaagggcagccact
ggagctgcatctagagacatgagccccttgccaaggagcccagacactgaggttgataga
tctccttggttttcagcattgcggtatgagcagccaaaaagaccccgtgctgattttaaa
aataatccagtaagagaaaataatgttagaacagggcttgctgctcaatcctccccttca
actattgttcagtcttctcttatgaactttctatcactaaacaagaggaagcatgaagac
agttgcaatcttattactgaagctccagtgctgagaaggggtacatgctcagggcaagtg
agaagaacaagtttagaagcaaatgcacctggtatttcagatgccaactcacttcagcaa
attagcctgtgggatcattctccacaaccttttgtacctaagaggacagaagtttcatta
cagcattctgaacctcctaatgttgggtctcctggtactgaagctccagtgctgagaaga
ggtacatgctcagggcaagtgagaagaacaagtttagaagcaaatgcacctggtatttca
gatgccaactcacttcagcaaattagcctgtgggatcattctccacaaccttttgtacct
aagaggacagaagttccattaaagcattctgaaccacctaatgttgggtctcctagtact
gaagcgcatctcctcaatccatgtgatgtccacagtacagaatttgatgcggatgaacaa
aatggtcgacgcctttcaaattttggtgctcccgatcaatgtttgaaggataccgaaccc
ccaaatacaccgtccaatataactttacttgatggtcatgataatgacacttcggtgtgc
tctacatcagtatcttattcagtgcagtttacaattgataagcttaggagaagaagaaaa
cgcggttttattgtatcacatgaaaacagagtccattgttctgagaaaactgcaaggtgt
tataaagccgcaacactggataattatgtaccaaatgacgacgagggaaaatctaattat
ttagctgcagccaccaatgagttggacaggtttttcagcaaagataattttggagaaatg
aaggttgttgggcagtttaatctcggttttatcatcggaaagctggaacaagacctattt
attgtagatcagcatgctgctgatgagaagtacaactttgagagcctgtcacagtcaaca
acgttaaacatacagcctcttcttcagccactgagacttgaactttcaccggaggaagaa
gttatcgtatctatgcacatgaacactatcagaaaaaatggttttgttttagcagaagat
ttgcatgcttctcctggcagtcattatcttttgaaagctgtaccgtttagtaaaaatatt
acatttggtgttcaagatgtgaaggagctgatttgcatgctttctgacagtcaaggtgac
tgttcaataattagtagctataagatggataaaactgactctgtttgcccttcgagggtt
cgtgccatgttcgcttcgagggcttgccgaatgtctactatgattggcgatccactgacg
aaaaccgaaatgaagaagatactgaaaaatctgacaggactaaggtccccttggaattgc
ccgcacgggaggccgacaatgcggcatcttgcagatctgactagtataaggttcaaagaa
gcaaattga
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