Aegilops tauschii (wheat D): 109768542
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Entry
109768542 CDS
T04345
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
ats03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109768542
03460 Fanconi anemia pathway
109768542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ats04121
]
109768542
03036 Chromosome and associated proteins [BR:
ats03036
]
109768542
03400 DNA repair and recombination proteins [BR:
ats03400
]
109768542
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109768542
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
109768542
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109768542
FA (Fanconi anemia) pathway
Downstream FA components
109768542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
109768542
NCBI-ProteinID:
XP_045090578
LinkDB
All DBs
Position
3:54008120..54020386
Genome browser
AA seq
1651 aa
AA seq
DB search
MPGRWRVWGQTDGRLVWVPAPEPDAPPSPAAASPLPPPLPPGCGAGIAAASSEDALAKGR
GAADGCRVESMADLLVQARNTLLEGDGMSGATVDAGQGQLFCTGSGRSVSVSERAIRRAR
ALVGEEVEKAGNKRKQPFDDVPGAEGELREMDAPFRGGVHNTAVPPVFQTGPGKAVLLGK
DSIQKARAILGEQPFDHVPDAERESSEMDAPFRGGVYNTTMPPVFQTGSGKAVLLGKDSI
QKARVLLEDVDSAAGAVQPMFRTGMGRPVPVSRTSIDKARAVLEGQTVAEKGVNGMEQFP
LFQTGSGRVVSVSAASVQKAKSVLKDNNTSEENTESFGRPNQPMMFQTGSGRPAMISERS
IERSRAVANEGDAEKSGHWDTDCQFPMFQTGLGKPVAVSWSSVQKAKAVLEEEKIKTTGR
GESSDCATTLQTETPTSVLMSSSLIMNSRSVTPKEDSAMQVTRTEKNHKDDDHVPLFQTG
LGRSIAISKSSLKRASAVLEPRNIAKELEDEAHLDGAHDTPVFRTGLGRSIIASENSRKE
LPILEAEEAVKSVNNYNGETFVEEATFQAGIQKFVPQNRISSHKASMLLEQRNFMEKGYK
DSGSQLPMFRTGSGKSVLISENSVQKARAVLEEQGINKGIIADQTYLRLSLFISIEVDNH
KLLNMDKKIPVFASPLKTSCARTVNISSVGVSRAATLLGLEENTLSTQFFGHVGDKLGTK
INFEQENPEQRLGLASYPTENQVHKEQHRPFELSNNTVSDSGEHSIRFSTAGGRSMAISS
DALERAKSLLGESDLMVSTNNLSYPLGSACNDKMQNSTVAPKEGGSDLSKRRRVSGRTEL
ATFSHQAMSDRKDTGSFGNAVSDIHPTSENTNRFHVGSRSTSEIPKIVKPSSRCLSETDN
TNDTKDKTRQLHMPAGALVDISNFMGSYSGNIDHVVNEKRRIGGRNSASSFKRPRSSRFI
TPISTNRQSSAGVPKLPPTQITSCRTKLSAYYPFQHKRKTWKEYFGGPPCFNCLAEHIID
EVKLMDAKGAERYKFHNMNTGAEEFHKLLIACGASLTYATKEWVNNHYKWIVWKLASLER
CYPTKAAGKFLTVANVLDELKYRYDREVNNGHRSAIKKILEGNALPSLMMVLCISAIYSH
PDVHKLEAVGTDENENSIKNKSLLAAKRNMPAHIELTDGWYALEASLDVALSEQLQKRKL
FIGQKLRIWGASLCGWTGPVSFHEASGTVKLMVHVNGSYRARWDDPLGFCKHVGPPLAFK
CIKASGGRVPRTLVGVARIYPVLYKERLPDGSSIVRSERMERKALQLYHQRVSKIAEDIM
SEQDENCASTDDSEEGAKICKMLEQAAEPEVMMAGLTSEQMISFSSYQAKQKEARQNEVA
KKVENALEVAGLSSRDVTPFLKVRVTGLAHKISATKTINKEGLITIWNPTEKQKADLVEG
QVYIATGLLPSAHCTNILYLHARGSSTMWKPLASAQAADFQPFFTPRKAVELSLIGEVPL
ASLSCSEFDIAGVVLHVGDVYLCSNQKRQWLFLTDGSKFISASQSTDQDDCLLAVSFSCS
SASDDGAFFSYALSGNTVGFSNLVKRQKDQTRRIWVAEATQSSTYTLSHEISKKSHLKEA
ATCAEKWASSSFDKIQQLKERVLCIIGDSGG
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaggtggcgggtctggggccagaccgacggccgcctcgtctgggtccccgcc
cccgagcccgacgcgccgccgtcgcctgccgcggcttcgcctcttcctcctcccctaccg
ccggggtgcggtgcggggatagccgccgcttcatccgaggacgcgctggcgaaaggccgg
ggcgctgctgacggatgccgcgtcgagtccatggccgacctcctcgttcaagcgcggaac
acactgctcgaaggtgacgggatgtccggagcaactgttgatgcaggacagggtcagctg
ttctgcactggatcggggaggtcagtgtctgtcagcgagagggctataaggagggccagg
gcgttggtcggggaggaggtggagaaggctggtaacaagagaaagcaaccgtttgacgac
gtacctggtgcagagggtgaattgagagaaatggacgccccattcagaggtggagtgcat
aacactgccgtgcccccagtgttccaaactggacccggaaaagctgttttgctgggcaag
gactcgatccagaaggcaagagctattttaggagagcaaccgtttgaccatgtacctgat
gcagagcgcgaatcgagtgaaatggacgccccatttagaggtggagtgtataacactacc
atgcccccagtgttccaaactggatcaggaaaagcggtcttactgggcaaggactcaatc
cagaaggcaagagttcttttagaagatgttgatagtgctgctggtgccgtacaaccaatg
ttccgtactggaatgggtaggccggttcctgtgagccggacctctattgataaggcaaga
gctgttttggagggacaaacagttgcagaaaaaggtgtgaacggcatggaacagtttcca
ttgttccaaactggttcaggaagagttgtctcagtcagtgcggcatctgttcagaaagct
aagtctgttttgaaggataataatacaagcgaggaaaatacagagagttttggtaggcct
aaccagcctatgatgttccaaactggttcaggaagaccagccatgatcagcgaaagatcc
attgagagatctagagctgtggcgaatgagggagatgcggaaaagagcggacattgggat
actgattgccagttcccaatgttccaaacaggattagggaagcctgttgctgtgagctgg
agctcagttcagaaggcaaaggcagtattggaggaagaaaaaattaaaacaactggacgt
ggagaaagcagtgattgtgccacaactcttcagactgaaacaccaacgtctgttttgatg
agtagcagtttgatcatgaatagtagaagtgttacaccgaaggaagatagtgcaatgcaa
gtcactcgaacagagaaaaatcacaaggatgatgaccacgtgccattgtttcaaactgga
ctagggaggtcaattgctataagtaagagctcacttaagagggcatctgcagttctggag
ccaaggaatattgcaaaggaattggaagatgaagctcatttagatggtgcccatgacact
ccagtgttcagaactggattaggaaggtctatcatagcaagtgagaactctagaaaggaa
ttgcctatcttagaggctgaagaagcagtaaaaagtgtaaacaattacaacggggaaacc
tttgttgaagaggcaacgttccaagctggaatacaaaagtttgtaccccaaaatagaatt
tcaagccacaaggccagtatgcttttggagcaacgaaacttcatggagaaaggatacaaa
gactctggaagtcaactgccaatgtttcgaaccggatctggaaagtcggtcttgattagt
gaaaactcagtacagaaagcaagggctgttctggaggaacaaggcataaacaaaggcata
atagctgaccaaacttatctgagactttcactgtttatttcaatagaagttgataatcat
aagctccttaacatggacaaaaaaattcctgtgtttgcgtcacctctcaagacaagctgt
gcaagaacagtaaatatatcttcagttggcgtgtctcgagctgctactttgttgggcttg
gaggagaataccctttcgacacaattttttggacatgtgggggataagctgggcacaaaa
ataaattttgagcaggaaaatccagaacagaggcttggtcttgcatcttatccaacagaa
aaccaagtgcacaaggaacaacaccggccatttgagctttctaataacacagtttctgat
tctggtgagcattctatcagattcagtaccgccggaggcagatcaatggctatttctagt
gatgcacttgaacgcgcaaaaagccttctgggtgaatcagatctcatggtttcaacaaat
aatttaagctaccctttgggatctgcttgtaatgataagatgcaaaattcaactgttgcg
ccaaaagaaggcggatctgatttatcaaaaagaagaagggtcagtggaagaaccgaactt
gcaacattttcccaccaggcaatgtctgataggaaggacactggatcctttggaaatgct
gtatctgatatccatccgactagtgaaaacaccaataggtttcatgttgggagtcgttca
accagtgaaattccaaagatcgtgaagccttcttccaggtgtttatctgaaactgacaac
acaaatgacactaaagataagacccgacaactccatatgccagctggagcgttggttgac
atcagtaacttcatgggttcatattctggaaatattgaccatgttgttaatgagaagaga
agaattgggggaagaaactccgcatcttcctttaaacggccccgctcttccaggttcatc
acgcctataagcaccaacagacagtcctctgctggagtacccaaactaccaccaactcag
atcacttcctgtcgaacaaagctgtctgcatattatccttttcaacataaaaggaaaact
tggaaagagtatttcggtggtcctccctgcttcaattgtttggcggaacatataatagat
gaagtgaagctcatggatgcaaaaggagctgagaggtacaagtttcacaatatgaatact
ggtgcagaagaatttcataagttgctgattgcctgtggggcttcattgacatatgcaact
aaagaatgggtgaacaatcactataaatggatcgtatggaaacttgcttcacttgagaga
tgctatccaactaaagctgctggcaaattcttgacagttgctaatgttttagacgagctg
aagtacaggtatgacagagaagtgaacaatggccatcgatcagccataaagaaaatttta
gaaggaaatgctttgccatctttgatgatggtgctgtgcatttcagctatttattcccat
cctgatgtacataagttagaggctgtcgggacagatgaaaatgaaaacagtatcaaaaat
aaaagcttgttagctgctaaaagaaacatgcctgcacacattgaattaactgatggatgg
tatgcactagaagcgtcattagacgtggcactttcagaacaactacagaaaagaaagctt
tttataggacaaaagcttcggatatggggagcttctttgtgtggttggactgggcctgtg
tcatttcatgaggcatctggcaccgtcaaattgatggtccatgtgaatggcagttatcgt
gcaagatgggatgatcctttgggattctgcaagcatgttggacccccactggcgttcaag
tgcataaaagcttctggtggccgagtccctaggacactggtaggagttgcaagaatatat
cctgttttgtacaaggagaggttgcctgatggtagttctattgtgagatctgaaaggatg
gaaagaaaggcgctacaactgtatcaccagagagtatctaagatcgcagaagacattatg
tctgaacaagatgaaaactgtgccagcactgatgacagtgaggaaggggcgaaaatttgc
aaaatgttagagcaggcggctgagcctgaagttatgatggctggcttgacctcagagcag
atgatatctttctcatcttatcaagcaaagcaaaaggaagctaggcaaaacgaagtagct
aagaaggtcgaaaatgctctggaagttgctggccttagttcaagagatgttacgccattt
ttgaaagtgagggtgacgggccttgctcacaaaatctctgctacaaaaaccatcaacaag
gaagggctaataacaatttggaaccctactgagaagcagaaagccgacctggtggaggga
caagtctacatcgccacaggattgctgccttctgcccactgtacgaacattctttacttg
catgctagaggatcatctacaatgtggaagccattagcatcggcacaggctgcagatttt
caaccattttttaccccacgtaaggcggttgagctgtcattgattggtgaggtaccactt
gcaagtctttcttgcagtgaatttgacattgcaggtgttgttttgcatgtcggcgatgtt
tacttatgcagcaaccagaaaaggcagtggctctttttgacagatggatctaaatttatc
tcggcatcgcagtccacagatcaagatgattgtcttctagcagttagcttttcttgctca
tctgccagcgatgatggtgcctttttcagttatgccctttctggaaatacagttggtttc
agtaacttggtcaagcgacagaaggaccagacaaggcgcatatgggtagccgaggcaaca
cagagctctacatacactctttcccatgagatatcaaaaaaatcgcatcttaaggaagct
gcaacatgtgctgagaaatgggcttcaagttcttttgataaaatccagcagctaaaggaa
agagttttatgcataattggtgatagcggtggctga
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integrated database retrieval system
