Aegilops tauschii (wheat D): 109768982
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Entry
109768982 CDS
T04345
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109768982
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109768982
Spliceosome [BR:
ats03041
]
Complex C
Other components
Complex C specific factors
109768982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
AAA_22
HA2_N
DEAD
AAA_19
AAA_30
AAA_29
AAA_7
Cas3-like_C_2
AAA_23
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109768982
NCBI-ProteinID:
XP_020183309
UniProt:
A0A453EEL1
LinkDB
All DBs
Position
3D:complement(115136741..115153452)
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AA seq
701 aa
AA seq
DB search
MSRFWRPGSEKPSASLVDDEEGGVLFLPTNTSASSSSSGFGYASLERLRQRLPVYKYRKA
ILYLVERHATTIIVGETGSGKSTQIPQYLKEAGWAEGGRLIGCTQPRRLAVQTVASRVAE
EVGVKLGEEVGYTIRFEDETNPGMTMIKFLTDGVLIREMMEDPLLSKYSVIMIDEAHERS
ISTDILLGLLKKIQRRRPELRLIISSATIEARSMSTFFSNRRKNSLLKPADGLPNPEPAI
LSVEGRGYTVETHYLEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQDDIDAALKLLN
DEIQHLGKHYFDLVILPLYSGLPRGDQDLIFAPTSKGKRKVVISTNIAETSLTLEGVVYV
VDSGFSKQKCYNPISDLESLVVAPISKASARQRAGRAGRVRPGKCFRLYTEEYYLNEMQS
DGIPEMQRSNLVSCIIQLKALGIDNILGFDWPASPSPEAMIRALEILFSLGILDEDAKLT
VPIGFQVAEMPLDPMISKMILSANDFGCSDEILTIAAFLSVQSVWVSMRGVKKEFDEAKL
RFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVIEIRAQLVRVMKRFGIQL
KSCDRDMQAVRKAIIAGSFANSCHLEEYGQNGMYKTIRTSQEVYIHPSSVLFRVNPKWVV
YQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPNPAPH
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttctggagacctgggtcggagaagccgagcgcctcgctcgtcgacgacgag
gagggcggcgtactcttcctcccgaccaacaccagcgcttcctcctcctcctccgggttt
gggtacgcgtccttggagaggctgaggcagcggctgccggtgtacaagtaccgcaaggcc
atcctctacctggtggagcggcatgccacgaccatcatcgtcggcgagaccggtagcggc
aagtcgacccagatcccgcagtatctcaaggaggctggttgggctgagggcggtcgactt
ataggttgcacccagccaagaagattggctgtgcagacggttgcgtcaagagtagctgaa
gaagttggtgtgaaacttggagaagaagtgggatatacaataagatttgaggatgaaaca
aacccgggcatgactatgatcaaatttctcacagatggggtactgattagagaaatgatg
gaagatcctcttctgagcaaatatagtgtcattatgatagatgaagctcatgaaagatcc
atttcaaccgacatattgctgggactcctgaaaaagattcaacgccgtcggccagagttg
cgcctaatcatttcctctgcaacaattgaagcaagatcaatgtcaacctttttcagcaat
aggcggaagaattcattgctcaagcctgctgatggtttgccaaatccagaacctgctata
ctttctgttgaaggtagaggatacacagtagaaactcattatctggaagagcctgtctca
gactacttacaggccgctgtgaatactgttcttattattcacgaaaaggaaccaccaggg
gatattttggtgtttttaactggccaggatgacatagatgctgctcttaagttgctaaat
gatgaaattcaacatctgggaaaacactatttcgatttggtgattttgcccttgtactct
ggccttccacggggagaccaagatctcatctttgctcctacttcgaaagggaaaagaaaa
gttgtgatatcaacaaacattgccgagacatcattgactctggagggcgtggtgtatgtt
gttgatagtggattttccaagcagaagtgttataacccgatttctgacctggagagtcta
gttgtcgcaccaatatcgaaagcttctgcaaggcaacgagcaggcagagctggaagggta
cgacctgggaaatgctttaggctttacacagaggaatattacctaaatgaaatgcagtca
gatggcattccagaaatgcaaaggtctaaccttgtttcctgcataatacagttgaaagcg
ctaggcatagacaacatcttggggtttgattggccagcttctccatcaccagaggcaatg
atccgggctctcgaaattctattttcactaggaattcttgatgaagatgccaaactaaca
gttcccattggtttccaagttgctgagatgcctctggaccccatgatctcaaaaatgatc
ttgtcagcaaatgattttggatgctctgatgagatattgacgatagcagcatttctatct
gttcagtctgtgtgggtttctatgcggggagtgaagaaggaatttgatgaggccaaactt
cggtttgctgctgctgagggtgatcatgtaacattcctgaatatctacaaaggatttcac
cagtctggaaaatctagtcagtggtgttacaagaactttttgaatcaccaagcactgaag
aaggtcattgaaatcagggcacagcttgtcagggttatgaagaggtttggcatacagctg
aaatcctgcgacagagatatgcaggcagttagaaaggccattattgctggttcgtttgct
aattcatgtcatctggaggaatatggccagaatggaatgtataaaacaattaggacgtca
caagaagtttacattcatccatcttccgtactcttcagggttaatccgaagtgggtcgtc
taccagtctcttgtttcaactgacaagcactatatgcgtaatgttattgccattgaacca
tcatggcttactgaagctgcaccacatttctaccagttccgaacacccaatccagctccg
cactaa
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