Aegilops tauschii (wheat D): 109769059
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Entry
109769059 CDS
T04345
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109769059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109769059
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109769059
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109769059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
109769059
NCBI-ProteinID:
XP_020183386
LinkDB
All DBs
Position
6:complement(466000749..466001996)
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AA seq
289 aa
AA seq
DB search
MAMSDLAAAVISKANGGVDGEEPVEIREVWADNLEAEFALIRDVVDEFPFVAMDTEFPGI
VCRPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSGPTGELPALGAGRRRCVWQFNFRE
FDDERDIFATDSIELLRHSGIDFRRNAERGVDARRFAELLMSSGVVLNDAVYWVTFHAGY
DFGYLLKILTCNSLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVER
VGESHQAGSDSLVTSCAFWKLKDSFFAGSTEKYAGVLYGLNAENGVSAH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcggatctcgcggccgcggtgatctccaaggccaacggcggcgtggacggc
gaggagccggtggagatccgggaggtgtgggcggacaacctggaggcggagttcgcgctg
atccgcgacgtcgtcgacgagttccccttcgtcgccatggacaccgagttcccgggcatc
gtctgccgccccgtcggcgccttccgctccccggccgactacaactacgccaccctcaag
gccaacgtcgacatgctgcacctcatccagctgggcctcaccttctcgggccccacgggc
gagctccctgccctcggcgccggacgccgccgatgcgtctggcagttcaacttccgggag
ttcgacgacgagcgcgacatcttcgccacggactccatcgagctgctccgccacagcggc
atcgacttccgccgcaacgccgagcgcggcgtcgacgcccgccgatttgccgagctgctc
atgtcctcgggcgttgtgctcaacgacgccgtctactgggtgaccttccacgcgggatac
gacttcggctacctgctcaaaatcctcacctgtaacagcctcccggacacacaggctggg
ttcttcaagctgatgaagatatatttccccactgtctatgacatcaagcatctcatgaag
ttctgcaacagcctgcacggcgggctgaacaagctcgccgagttgctcgatgtggagcgt
gttggagagtcacatcaggccgggtccgatagcctggtcacgtcttgtgcgttctggaaa
ctcaaggattccttctttgctggatcaaccgagaaatatgcaggcgtgctgtatgggctc
aatgcagagaatggtgtcagtgcacattga
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