Aegilops tauschii (wheat D): 109769288
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Entry
109769288 CDS
T04345
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03013
Nucleocytoplasmic transport
ats03015
mRNA surveillance pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109769288
09122 Translation
03013 Nucleocytoplasmic transport
109769288
03015 mRNA surveillance pathway
109769288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109769288
03041 Spliceosome [BR:
ats03041
]
109769288
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109769288
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109769288
Spliceosome [BR:
ats03041
]
Complex C
Other components
EJC/TREX
109769288
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109769288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
109769288
NCBI-ProteinID:
XP_020183629
UniProt:
A0A453EVV9
LinkDB
All DBs
Position
3:complement(265673467..265681893)
Genome browser
AA seq
428 aa
AA seq
DB search
MGEAKDAEVYEEDLVDYDEEVENAVDGAAANPSVDVVKKGYVGIHSSGFRDFLLKPELLR
AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVAALV
LCHTRELAYQICNEFERFSKYLSETKVAVFYGGVHIKKHKDLLKNECPHIVVGTPGRILA
LARDKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHEKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQIVIFVKSVG
RASELNRLLCECNFPAICIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagccaaggacgccgaggtgtacgaggaggatctcgtcgactacgacgaggag
gtggagaacgccgtcgacggcgcagccgccaacccttccgtcgacgtcgtcaagaagggt
tacgtgggaatccacagctcagggttcagggacttcctgctcaagccagagctgctccgt
gcgatccaggactgcgggtttgagcatccttccgaagtgcaacatgaatgcatccctcaa
gccattctcggaatggatgtcatctgtcaagcaaaatctgggatgggcaagactgctgtt
tttgtcctctcaactctccagcagattgatccggttgctgggcaagtagctgcacttgtg
ttatgccatacacgagagttagcataccagatttgcaatgaattcgagaggtttagcaag
tacctgtcagaaacaaaagttgctgtcttctatggtggcgttcacataaaaaaacacaag
gatttgttgaagaatgaatgtcctcacattgtggttggcacacctggaaggatcctagct
ctggctagagacaaggacctttcattgaagaatgtgaggcatttcattcttgatgaatgt
gacaagatgcttgattcacttgacatgcgtagagatgtccaggagatcttcaagatgaca
ccccatgagaaacaagtgatgatgttttcagcaacactcagcaaggagattcgcccggtt
tgcaagaaatttatgcaagatcccatggaaatttatgttgatgatgaggctaaactgacc
cttcatggtctagttcagcactatattaaactaagtgaggcggagaagaatcggaaattg
aatgatctcttagatgcgctcgacttcaaccaaattgtgatatttgttaaaagtgttggt
agagcttcagaacttaacaggctgctctgtgaatgcaattttcctgcgatctgcatacat
tcgggaatgacacaggaggagaggttgacccggtataagaacttcaaggaagggcacaag
aggatccttgtggctacggatttggttggcagggggattgatattgagcgtgtcaatatt
gtcataaactatgacatgcctgattctgctgatacatacttgcacagggttggaagggct
gggcgttttggaaccaaagggcttgcaataacatttgttgcttctgcctctgactctgac
gtcctcaatcaggtgcaagaaaggtttgaggtcgacatcaaggagctgcctgagcagatc
gacacttcaacatacatgccatcttga
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