KEGG   Aegilops tauschii (wheat D): 109770120
Entry
109770120         CDS       T04345                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109770120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109770120
   03041 Spliceosome [BR:ats03041]
    109770120
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109770120
Spliceosome [BR:ats03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109770120
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Ge1_WD40 Asparaginase_2 Beta-prop_SPT8 v110
Other DBs
NCBI-GeneID: 109770120
NCBI-ProteinID: XP_020184426
LinkDB
Position
5D:complement(307463463..307467582)
AA seq 384 aa
MAAATATVQAQPGLDAREWDEAAYRRGILRERDLSCRTLFRAVFYDQRDEPDPDVLLAAA
SSDGSLASFSLSSCIASSASAHAAPQPAAAALVDPVCIVQAHSGPVYDAKFYNDPIQPLL
FSCGDDGHIRGWRWHEMQSCLLPLSLQGDHVEPILDLVNPQHEGPWGARSPIPENNAIAI
SKQDGSLFAAAGDACAYCWDVESGKCKMTFKGHTDYLHSIAVREANHQVVTGSEDGTARI
WDCRSGKCTQTIRPVQNKKTEGSWVGCIAIDASESWLACGTSSGISVWSLLSNECIFNAD
CGAPVQDLLFDKNQILAVGAEPALSRFTINGVVVSQIKCAPPSAFSVSMHSSGMAAVAGH
GGLVDVISGFGSHLCAFCCRGLDR
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggcggcggcgacggcgacggtgcaggcgcagccaggactcgacgcgcgcgagtgggac
gaggcggcgtaccggcggggcatcctgcgggagcgcgacctctcctgccgcaccctcttc
cgcgccgtcttctacgaccagcgcgacgaacccgacccggacgtcctcctcgccgccgcc
tccagcgacggctccctcgcgtccttctcgctgtcctcctgcatcgcctcctccgcctcc
gcccacgccgccccccagccggccgccgccgcgctggtcgaccccgtctgcatcgtccaa
gcgcatagcggccccgtctacgacgccaagttctacaacgatccgattcagccgctgctc
ttcagctgcggggatgacggccacattcggggttggagatggcacgagatgcagagctgc
cttctgccactctctctgcaaggggatcatgttgaaccaatacttgacttggttaaccct
cagcatgaaggcccttggggtgcacggtctccaataccagaaaataatgccattgcaatt
agcaaacaggatggatctcttttcgcagcagcgggtgatgcatgtgcttattgctgggat
gtggaaagtggcaagtgtaaaatgacctttaaggggcatactgactatttgcatagtatc
gcagttcgtgaggcaaaccaccaggtggtaactggatcagaagatgggacagcccgcatc
tgggattgcagaagtgggaagtgtacgcagacgatacgtccagtacagaacaagaaaact
gagggctcgtgggtcggttgcattgccattgatgcgagtgaaagttggctggcttgtggt
acttctagtggtatatcagtttggagtcttctttcaaatgagtgcatctttaacgcagat
tgtggtgctcctgttcaagatttgttgtttgacaaaaatcaaattttagcggtcggcgct
gaacctgcgctctcccgtttcacgatcaacggggttgttgtttcgcaaataaagtgcgct
cctccatcggcattttctgtctccatgcattcgtccgggatggcagctgttgctgggcat
gggggtctggtggatgtcatctctggatttgggagccatctctgcgcgttttgctgccgt
ggcctggataggtaa

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