Aegilops tauschii (wheat D): 109770541
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Entry
109770541 CDS
T04345
Name
(RefSeq) squalene synthase 1 isoform X2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00100
Steroid biosynthesis
ats00909
Sesquiterpenoid and triterpenoid biosynthesis
ats01100
Metabolic pathways
ats01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109770541
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
109770541
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ats01006
]
109770541
Enzymes [BR:
ats01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
109770541
Prenyltransferases [BR:
ats01006
]
Terpene biosynthesis
Squalene/phytoene synthase
109770541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
109770541
NCBI-ProteinID:
XP_020184840
UniProt:
A0A453M5C4
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Position
5:526428244..526434288
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AA seq
404 aa
AA seq
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MGVLSRPEEVPALLRLKLAAGRIRRQIPPQDHWAFAYDMLQRVSRSFALVIQQLGPDLRN
AVCVFYLVLRALDTVEDDTAIPNEVKLPILRDFYRHIYNPDWLFSCGANDYRVLMDNFRQ
VSTAFLELGEGYQKAIEEITRRMGEGMAKFICTEVETIDDYDEYCHYVAGLVGYGLSRLF
HATGTEDLAPDHLSNSMGLFLQKTNIIRDYLEDINEIPRCRMFWPREIWSKYVDKLEDLK
YEENSEKAVQCLNDMVTNALIHAQDCLQYMSALKDNSNFRFCAIPQIMAIGTCAICYNNV
KVFRGVVKMRRGLTARVIDETKSISDVYSAFYEFSSLLESKIDDNDPNAALTRRRVDAIK
KTCKSSGLLKRRGYDLEKSMYRMPMLIMIALLLVAIILGVLYGK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgtcgcggccggaggaggtgccggcgctgctcaggctcaagctggcggcg
gggcggatcaggcgccagatccccccccaggaccactgggccttcgcctacgacatgctc
cagcgggtctcccgcagcttcgcgctcgtcatccagcagctcggaccagacctccgcaat
gccgtgtgcgtcttctacctcgtgctccgggccctggacaccgtcgaggacgacaccgcc
atccctaacgaggtcaagctgcccatccttcgggacttctaccgccacatctacaacccg
gactggctcttttcatgtggagcaaacgactacagagtgctcatggataattttagacaa
gtctccacggctttcttggagctaggcgaaggataccaaaaggctattgaagaaatcact
aggcgaatgggagaaggaatggctaaatttatatgcacggaggttgaaaccattgatgac
tatgatgagtactgccactatgtagcagggctagtaggctatggactttctaggctcttt
catgctactggcacagaagatctggctccggatcatctttcaaattcaatgggtttattt
ctacagaaaaccaatataataagggattatttggaggacataaatgagataccaaggtgc
cgtatgttctggcctcgggaaatatggagtaaatatgttgataaacttgaggatttaaaa
tatgaggaaaattcagaaaaggccgtgcagtgcttgaatgatatggtaaccaatgctttg
atccatgcccaagattgccttcaatacatgtcagcattgaaggacaattccaattttcga
ttttgtgcaatacctcagataatggcaattgggacctgtgctatttgctacaataatgtg
aaagtctttagaggagttgttaagatgaggcgtgggctcactgcacgggtaattgatgag
acaaaatcgatatcagatgtctattctgctttctacgagttctcttcattgctagagtcg
aagattgatgataacgacccaaatgctgcgctgacacggaggcgtgtggatgcaataaag
aaaacttgcaagtcatccggcctgctgaagcgaaggggttacgatctggagaaatcaatg
tacagaatgcctatgctgatcatgatcgcgcttcttctggtggctattatcttgggtgta
ctgtatggcaagtga
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