Aegilops tauschii (wheat D): 109770544
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Entry
109770544 CDS
T04345
Name
(RefSeq) LOW QUALITY PROTEIN: chlorophyll a-b binding protein of LHCII type 1
KO
K08912
light-harvesting complex II chlorophyll a/b binding protein 1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00196
Photosynthesis - antenna proteins
ats01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
109770544
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ats00194
]
109770544
Photosynthesis proteins [BR:
ats00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
109770544
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GFIT
Motif
Pfam:
Chloroa_b-bind
PhosphMutase
Motif
Other DBs
NCBI-GeneID:
109770544
NCBI-ProteinID:
XP_020184842
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Position
5D:complement(519122294..519126396)
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AA seq
401 aa
AA seq
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MAATTMSLSSPAFAGKAVKNLPSSSLFGDARVTMRKTAAKAKQVVSGSPWYGSDRVLYLG
PLSGEPPSYLNGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGG
PLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL
ENLADHLTDPVNNNAWAFATNFVPGKXGAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ
VVLMGAVEGYRIAGGPLGEIIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSM
FGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaccaccatgtcactctcttctccagcctttgccggcaaggcagtcaagaac
ttgccatcatcgtctcttttcggggacgcccgcgtcaccatgcgcaagacggcggcaaag
gccaagcaggttgtctccggcagcccgtggtatggctctgaccgcgtgctctacctcggc
ccactttctggcgagcccccgagctacctcaatggtgagttccctggcgactacggctgg
gacaccgctgggctgtcggccgaccccgagacctttgccaagaaccgtgagctggaggtg
atccattgccgttgggccatgcttggcgcgctcgggtgcgtcttcccagagctgctcgcc
cgcaacggtgtgaagttcggcgaggctgtttggttcaaggccggatcccagatcttcagc
gagggcggcctcgactacctcggcaacccaagccttgtgcacgcccagagtatccttgcc
atctgggcttgtcaggtcgtgctcatgggcgccgtcgagggctaccgcattgccggtgga
ccgcttggtgagatcgttgacccgctctacccaggcggtagcttcgacccactcggcctt
gccgacgaccctgaggcattcgccgagctcaaggttaaggagatcaagaacggccgcctc
gccatgttctccatgttcggtttctttgtgcaagccatcgtcaccggtaagggtccactc
gaaaacctcgctgaccacctcactgaccccgtcaacaacaacgcctgggcattcgccacc
aacttcgttcccggcaagtaaggtgctggatcccagatcttcagcgagggcggcctcgac
tacctcggcaacccaagccttgtgcacgcacaaagtatccttgccatctgggcttgtcag
gttgtgctcatgggcgccgtcgagggctaccgcattgccggtggaccactcggtgaaatc
atcgacccactctacccgggcggcagctttgacccgcttggccttgccgacgaccctgag
gcattcgccgagctcaaggttaaggagatcaagaacggtcgccttgccatgttctcaatg
ttcggtttctttgtgcaagccatcgtcaccggcaagggtccacttgagaacctcgctgac
cacctcgccgaccccgtcaacaacaacgcatgggcattcgccaccaactttgttcctggc
aagtaa
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