Aegilops tauschii (wheat D): 109772228
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Entry
109772228 CDS
T04345
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ats04131
]
109772228
04121 Ubiquitin system [BR:
ats04121
]
109772228
Enzymes [BR:
ats01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109772228
Membrane trafficking [BR:
ats04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109772228
Ubiquitin system [BR:
ats04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109772228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING-like
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
109772228
NCBI-ProteinID:
XP_020186507
LinkDB
All DBs
Position
3:622616869..622618647
Genome browser
AA seq
393 aa
AA seq
DB search
MDRWAATAAGPAAPPSYWCYSCERFVRTAGDAGLVCPGCDGGFLEQMDAPPPRRAASPSA
FLRRRAAEAPTEVRPRRGRRGGAASGDRSGSPYNPVIVLRRSAAPPGDEAPGATSSFELF
YDDGAGSGLRPLPESMSDFLMGSGFERLLEQLAQIEAGGFGAVRPCDNPPASKAAVESMP
TVVVAACHVGADSHCAVCKEAFQLGDEAREMPCSHMYHQDCILPWLALRNSCPVCRHELP
TDVARPAPASDLGAADDQGSNTGAEAGSEEETTVGLTIWRLPGGGFAVGRFAGGRRAGER
ELPVVYTEVDGGFNNGGAPRRISWSSRGSRSSQRGVIRRMFDNMFACFGHTHSTNVTRAS
SSRSEWSSVFTRGLRSRSTSWRSQDSHADAVAR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatcggtgggcggccacggctgccggcccggcggcgccgccgtcctactggtgctac
agctgcgagcggttcgtgcgcacggcgggggacgccgggctggtctgccccggctgcgac
ggcggcttcctggagcagatggacgcgccgccgccgcgcagggccgcctcgccctccgcc
ttcctccgccgccgcgccgccgaggcgcccaccgaggtccggccccgccgcggcaggcgt
ggcggcgccgcctcgggggaccgctccggctcgccgtacaacccggtcatcgtgctccgg
cgctccgcggccccgcccggcgacgaggcccccggcgccaccagcagcttcgagctcttc
tacgacgacggcgccggatccggcctccgcccgctgcccgagagcatgtccgacttcctc
atggggtccgggttcgagcgcctcctcgagcagctcgcccagatcgaggccggcggcttc
ggcgccgtccgcccctgcgacaacccgccggcctccaaggccgccgtcgagtccatgccc
accgtcgtcgtcgccgcctgccacgtaggcgccgactcccactgcgccgtctgcaaggag
gccttccagctgggcgacgaggccagggagatgccctgcagccacatgtaccaccaggac
tgcatcctgccgtggctcgcgctgcgcaactcgtgccccgtgtgccggcacgagctgccc
acggatgtggcgcggcctgctccggccagcgacctgggcgccgctgacgaccagggcagc
aacaccggggctgaggctggcagcgaggaggagacgacggtggggttgacgatttggcgg
ctccctggaggaggctttgccgtcgggaggttcgctggtggccggagggccggcgagagg
gagctcccagttgtctacaccgaggtggacggcggtttcaacaatggcggtgcaccgagg
aggatctcatggtcatcaagagggagccgttcgtcgcagaggggagttattagacgcatg
ttcgacaacatgtttgcttgctttgggcacacccattcgaccaatgtgactcgagcctca
tcctcgaggtcagagtggagctcggttttcacccgtggtctgaggagccgcagcacaagc
tggagatcccaagatagccacgccgatgcggtcgccaggtga
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