Aegilops tauschii (wheat D): 109772683
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Entry
109772683 CDS
T04345
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats00040
Pentose and glucuronate interconversions
ats01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109772683
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109772683
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_S13
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
109772683
NCBI-ProteinID:
XP_073363789
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Position
2:complement(9306083..9311743)
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AA seq
473 aa
AA seq
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MAEQAGARRRWAALAALGAVSVVLLFVALSGGGGVAGLSGGSRLRSASTAKVVTAAARRW
LRDSTSRLTATATAARSERADDHADGSAVAVAVDDPEAVVSQVHMSIRNSTARRNLGYLS
CGTGNPIDDCWRCDSDWHNNRQRLADCGIGFGRNAIGGRDGKIYVVTDAGDDDPVNPRKG
TLRHAVIQDEPLWIIFKRDMVITLSQELIMNSFKTIDGRGANVHIANGACITIQYVTNVI
IHGLHIHDCRPTGNAMVRSSPSHYGWRTMADGDAVSIFGASHVWVDHCSLSNCADGLVDA
IMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCRHGYF
HVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWNWRSE
GDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcaagcgggtgccaggaggaggtgggccgcgctggcggcgctcggggccgtc
tccgtcgtcctcctcttcgtcgccctctccggcggcggcggcgtcgcggggctctccggc
ggcagcaggctccggtccgcgtcgacggcgaaggtggtgaccgcggcggcgaggcggtgg
ctgcgggactccacatcacggctcacggcgacggcgacggcggcgaggagcgaacgtgcc
gacgatcacgccgacggttccgcggtggcggtggcggtggatgacccggaagcggtggtc
tcgcaagtgcacatgtcgatcaggaacagcaccgcccggaggaacctggggtacctgtcg
tgcggcaccgggaaccccatcgacgactgctggcgctgcgactcggactggcacaacaac
cggcagcgcctggccgactgcggcatcggcttcggccgcaacgccatcggcggccgcgac
ggcaagatctacgtggtcaccgacgcgggcgacgacgaccccgtgaaccccaggaagggc
accctgcgccacgccgtcatccaggacgagccgctgtggatcatcttcaagcgcgacatg
gtcatcaccctctcccaggagctcatcatgaacagcttcaagaccatcgacggccggggc
gccaacgtgcacatcgccaacggcgcctgcatcaccatccagtacgtcaccaacgtcatc
atccacggcctccacatccacgactgccgccccaccggcaacgccatggtgcgcagctcg
cccagccactacgggtggcgcaccatggccgacggcgacgccgtctccatcttcggcgcc
agccacgtctgggtcgaccactgctccctctccaactgcgccgacggcctcgtcgacgcc
atcatgggctccaccgccatcactgtctccaacaactacttcacccaccacaatgaggtg
atgctcttgggccacagtgactcctacctcaaggacaaggcaatgcaggtcaccatagct
ttcaaccatttcggggaagggctcatccagaggatgccaaggtgcaggcatggttacttc
cacgtggtgaacaatgactacacccactgggagatgtacgccatcggagggagcgccgag
ccgaccatcaacagccaggggaaccgctacctcgcgccaaccaacccttttgccaaggag
gtgacaaagagagtcgagaccgcccagaccacctggaaggcctggaactggaggtcagag
ggcgacatgctgctgaacggcgccttcttcaccccgtcgggagcaggcgcgtcagccagc
tactcgcgcgcctccagcctcggcgccaagtcctcatccatggtcgccaccatcacctcc
ggcgcgggcgccctgtcgtgccacaagggctcctcctgctag
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