Aegilops tauschii (wheat D): 109772932
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Entry
109772932 CDS
T04345
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109772932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ats03032
]
109772932
03400 DNA repair and recombination proteins [BR:
ats03400
]
109772932
DNA replication proteins [BR:
ats03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
109772932
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
109772932
BRCA1-C complex
109772932
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Motif
Pfam:
FHA
BRCT
Nbs1_C
Yop-YscD_cpl
DUF6425
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
109772932
NCBI-ProteinID:
XP_020187223
UniProt:
A0A452YHD6
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Position
1:234656545..234660805
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AA seq
574 aa
AA seq
DB search
MVWALTPVGTERGAQKYYISAAGTYTVGRKDCDIVQTETSISRVHAEIAVEKMVAWEPRS
GAPASPSCVSVVDRSKYGTFVNKVQGTQGSRLRKDEVVVLSDGDTVTFGNGNMTFRFSFI
PIVVFFHGKKSARIDRSLQAVMTSIGAYVTRKWIDTCTHVLVDESSPLTPELLDAIITKK
PIILGNWFKAMAEKNIHTEIPSCTQYIPNLTLDGMDIKMVENKLMENCLAGHTFILGSSE
KYKFGEKIQELLESTGAKYLSIEEFCANSQDSGAGDNDQQILLVPAKSPLEFSKMRPLFP
LSKTTDVKLFAAILSGRLEAAAIEPPAYMIASSNTTDETIVADSDVETDTAISDHTVAAS
KSQHHILHMSDDKAESKVTSSVSAVNLEETNVSINIQNDLEKEEISEPMEEDVQVIEKTT
ISGFKAGGEHVRVINKVVQDEACDAVFVNKAPKDENLDSSREETCHVIFSQDLIVKRVLR
PAPTVSTETGGVNFKRFKKRQTVSGNSFKALIPCAQEPYRESDYEKGTLNDFMREEKRRK
QMESIAEDLFNNQKPQKKKAAAGSSIQTLLTGCR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggcgctgacccccgtcggcacagagcgcggggcgcagaagtactacatctcc
gccgccgggacgtacacggtcggccgcaaagattgcgatatcgttcaaacagaaacgtcg
atatcccgagtgcatgcggagatagcagttgaaaagatggttgcctgggagccacgttct
ggtgctccagcaagcccttcatgtgtcagtgtagttgatcgttcaaaatatggcacattt
gtcaacaaggtacaggggacccagggcagtcgtctacgtaaagatgaagttgtggtgctt
tccgatggcgataccgtgactttcggaaatggcaacatgacctttaggttctcgtttatc
cccatagtggtcttttttcatggcaaaaagtcggcacgaattgatcgatcattgcaggca
gtcatgacatctattggtgcatatgttactcgtaagtggattgatacatgtacacatgtt
cttgtggatgaatcatctccattgacacctgagctccttgatgcaatcatcacaaaaaag
ccaatcatcttgggaaactggttcaaggcgatggctgaaaagaacatacacacggagatc
ccttcttgtacacaatatattccaaacttgactcttgatgggatggatataaagatggtt
gagaacaagctcatggagaattgcctagcaggccatacttttatcctggggtcgtcagaa
aagtataaatttggagagaaaatacaagagctactggaatcaactggagcaaaatatctc
agtatcgaggagttttgtgctaacagccaggactctggagctggagacaatgaccaacaa
attcttcttgttcctgcaaaatctcctttggagttcagtaagatgcgtcctctatttcct
ttgtccaagaccactgacgtgaagctatttgctgctatattgtctggtcgcttggaagca
gctgctattgaaccacctgcttacatgattgcatcctccaatacaacggatgaaactatt
gtggcggattctgatgttgaaactgatactgcaatatctgatcatactgttgctgctagc
aagtctcagcaccatattctgcatatgtctgacgataaagcagaaagtaaagttacaagc
agtgtgagtgctgtaaatttagaagaaacaaacgtcagcatcaatattcagaacgacctg
gagaaagaagaaatttcggaacccatggaggaggatgttcaggtcatagagaaaacaaca
atttctgggttcaaagctggaggtgagcatgttcgggttatcaacaaggtggtgcaggat
gaggcttgtgatgctgttttcgtgaacaaggcgcctaaggatgagaacttggacagtagc
agggaagagacttgtcatgttattttcagtcaagatctgattgtcaaaagggtccttcgg
ccagctcctaccgtgtcaacagaaactggaggcgttaacttcaaacgattcaaaaagagg
caaaccgtgtctggaaacagcttcaaggcccttattccatgtgcacaagaaccatacaga
gaatctgattatgaaaagggtaccttgaatgatttcatgagagaggagaagcggcgaaaa
caaatggagtccatcgcagaggacctcttcaacaaccagaagccgcagaagaagaaggcg
gctgcgggcagttcaatccagaccctgctcaccggttgccgatga
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