KEGG   Aegilops tauschii (wheat D): 109773133
Entry
109773133         CDS       T04345                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03030  DNA replication
ats03410  Base excision repair
ats03420  Nucleotide excision repair
ats03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109773133
   03410 Base excision repair
    109773133
   03420 Nucleotide excision repair
    109773133
   03430 Mismatch repair
    109773133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ats03032]
    109773133
   03036 Chromosome and associated proteins [BR:ats03036]
    109773133
   03400 DNA repair and recombination proteins [BR:ats03400]
    109773133
DNA replication proteins [BR:ats03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109773133
  DNA Replication Termination Factors
   ELG1-RFC complex
    109773133
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109773133
DNA repair and recombination proteins [BR:ats03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109773133
  Check point factors
   HRAD17(Rad24)-RFC complex
    109773133
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Rad17 Mg_chelatase AAA_16 Viral_helicase1 RuvB_N RCF1-5-like_lid nSTAND3 AAA_11 AAA_assoc_2 AAA_19 AAA_25 AAA_28 AAA_5 AAA_30 DNAX_ATPase_lid ABC_tran AAA_24 IstB_IS21 RNA_helicase AAA_3 MeaB bpMoxR AAA_18 NTPase_1 DUF6120 DO-GTPase1
Other DBs
NCBI-GeneID: 109773133
NCBI-ProteinID: XP_020187420
LinkDB
Position
2:complement(513592116..513595971)
AA seq 334 aa
MAAASSAAAAPADTYDIPWVEKYRPSRVADVVGNADAVSRLEVIARDGNMPNLILSGPPG
TGKTTSILALAHEMLGPSYREGVLELNASDDRGLDVVRNKIKMFAQKKVTLPPGRHKIVI
LDEADSMTTGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEIL
GRLMVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATVSGFRFVNQENVFKVCDQPH
PLHVKSMVKNVLDGKFDEACSGLKQLYDLGYSPTDIITTLFRVIKNYDMAEYLKLELLKE
TGFAHMRICDGVGSFLQLSGLLAKFALVRETAKA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggccgccgcctcctccgcggccgccgcccccgccgacacgtacgacatcccgtgggtg
gagaagtaccgccccagccgcgtcgccgatgtcgtcggcaacgccgacgccgtcagccgc
ctcgaggtcatcgcccgcgacggcaacatgcccaacctcatcctctccgggcctccgggg
accgggaagacgacgagcatcctggcgctcgcccacgagatgctcgggcccagctaccgc
gagggagtgctcgagctcaacgcctcggacgacagggggcttgatgtggtgcggaacaag
atcaagatgttcgcgcagaagaaggtcacactgccacccggacggcacaagatcgtcata
ctggacgaagctgacagcatgacaacaggagcacagcaagcactgagaagaaccatggag
atttattccaacaccacaagatttgctcttgcatgcaatacttcatctaaaatcattgaa
cccatccaaagtcgctgcgctattgtccggttctcgaggctttcagatcaggagatcctt
ggccgccttatggtcgtggtggcagctgagaaggtcccttatgtgccagaaggtcttgaa
gccatcatttttactgctgatggtgacatgaggcaagctttgaacaatttgcaagctaca
gtcagcgggttccgttttgttaatcaagaaaatgtgttcaaggtatgcgatcaaccacat
cccttgcatgtcaagagtatggtgaaaaatgtactcgatgggaagtttgatgaggcctgc
tctggcctaaagcaactctatgatttgggctactctcctactgacatcatcactaccctc
ttccgtgtcatcaagaactatgacatggctgaatatctgaagctggaactgctgaaggaa
acgggatttgcgcacatgaggatctgtgatggcgttgggtcattccttcagctttctggc
cttctggccaaatttgctctggtgagagaaacagcaaaggcctaa

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