Aegilops tauschii (wheat D): 109773154
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Entry
109773154 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109773154
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109773154
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
109773154
NCBI-ProteinID:
XP_020187439
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Position
4:115818730..115823102
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AA seq
677 aa
AA seq
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MAAVLILLLAAAVGVAAPVAPSPAARGAGVTLHVEHHQVVVDNGVVQVTVSKPQGQITGV
RYAGERNLLHFTSDENSGGYWDVVWNFPGSGHPRGMIDMLDSTDFRVVSASEEQVELSFR
STYDPSRLNSVRLTVDKRLVMLRGSSGFYCYAVLEHAGSWPALNITEARLAFKLNTARFT
YMAVSDEIQRYMPRAADRDAPRGMPLAYKEAVLLLNPAEPQFKGEVDDKYQYSLDNKDNA
VHGWIAGAPGPAVGFWVVTPSNEFKTGGPLKRELTSHVGPTSLTMFMGTHYVGNDIVAKI
KEGEHWKKVMGPVFIYLNSNPERGNFHTLWEDAKAQAEAEASKWPYTFPESPDFHKAGQR
GSVTGRLLVRDRFVSGKDMPARRAYVGLAAPGQPGSWAIESKGYQFWTRASATCGSFAIG
NVRAGVYNLYAWVPGTLGDYMHTAAVTVDAGGAVALGDLVFEPPRSGPTLWEIGVPDRSA
AEFFVPEPNPKYVNKLFLSKDKYRQYGLWDRYAELYPAGDPVFTVGESHYSKDWFFAHVT
RKMSNGSDAPTTRRIRFGLSRVVADGTYTLRVALAAAHMSRLQLRVNGAPVTRRGSSADA
GVFVTPDFGDGNAIARHSDHGTWWSFEFGINGYLLMEGENTISITQVRALSEFMGVMYDY
IRLEGPPGSWRDPTQLP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttctgatcctcctgctcgccgccgcggtgggcgtggctgcgccggtggcg
ccgtcgccggcggcacgcggcgctggcgttacgctgcatgtagagcatcaccaggttgtg
gtggacaacggcgtggtgcaggtaacggtgtcgaagccgcaaggccagatcaccggcgtc
cgctacgccggcgagcgcaacctcctccacttcaccagcgacgaaaactctggcgggtac
tgggacgtggtttggaactttccagggtccggtcatccaagaggcatgatcgacatgctg
gacagcacagatttccgggtcgtatcggccagcgaagagcaagtggagctctccttcagg
agcacctacgacccatcacgcctcaacagcgtccggctcaccgtcgacaagaggctggtg
atgctgagaggcagctccgggttctactgctacgccgtcctggagcacgccggcagctgg
ccggccctcaacatcacggaggcccggctcgccttcaagctcaacacggcgaggttcacc
tacatggcggtctcggacgagatccagaggtacatgccgcgggcggcggaccgggacgcg
ccccgcggcatgcccctggcctacaaggaggccgtgctcctcctcaaccccgccgagccg
cagttcaagggcgaggtggacgacaagtaccagtactcgctcgacaacaaagacaacgcg
gttcacggctggatcgccggcgctcccggcccggccgtggggttctgggtcgtcaccccc
agcaacgagttcaagaccggcggcccgctcaagcgcgagctcacctcccacgtcggcccc
acctccctcaccatgtttatgggaacacattacgtcgggaacgacatcgtcgccaagatc
aaggagggcgagcactggaagaaggtcatgggcccggtgttcatctacctcaactccaac
cccgagagggggaacttccacacgctgtgggaggacgccaaggcgcaggccgaggccgag
gccagcaaatggccctacaccttcccggagtcgcctgatttccacaaggccggccagagg
ggctctgtcaccggccgattgctggtcagggacaggttcgtgagcggcaaggacatgccc
gcccgccgtgcctacgtcggcctcgccgcgccggggcagccgggctcctgggcgatagag
agcaagggttaccagttctggacgagggcgtcggcgacatgcggcagcttcgccatcggc
aacgtccgggcaggggtgtacaacctctacgcctgggtgcccgggaccctcggcgactat
atgcacacggctgccgtgacggtggatgccggcggcgccgttgccctcggcgacctcgtg
ttcgagccgccgcggtcggggccgacgctgtgggagatcggcgtgcctgaccggagcgcc
gccgagttcttcgttcctgagcccaaccccaagtacgtcaacaagctcttcctcagcaag
gacaagtacaggcagtacgggctgtgggacaggtacgctgagctgtaccccgccggcgac
cccgtcttcaccgtcggcgagagccactactccaaggactggttcttcgcgcacgtcacg
aggaagatgagcaacggctccgacgcgccgacgacgcgacggatccggttcggcctgtcc
cgcgtcgttgccgacggcacctacacgctgcgggtggcgctcgcggcggcccacatgtcg
aggctgcagctgcgggtgaacggggcgccggtgacgaggaggggatcgtcggccgacgcc
ggagtgttcgtgacgccggacttcggcgacggcaacgcgatcgcgaggcacagcgaccac
ggcacgtggtggagcttcgagttcgggatcaatgggtacctgctcatggaaggggagaac
accatcagcatcacgcaggtcagggccttgagcgagttcatgggggtcatgtacgactac
atccggctggaagggcctcccggttcttggcgagatcccacacaacttccgtga
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