Aegilops tauschii (wheat D): 109773214
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Entry
109773214 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109773214
Enzymes [BR:
ats01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109773214
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
SpaA
CarbopepD_reg_2
RhgB_N
Motif
Other DBs
NCBI-GeneID:
109773214
NCBI-ProteinID:
XP_020187498
LinkDB
All DBs
Position
6:85802397..85805457
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AA seq
670 aa
AA seq
DB search
MATTAHLILLAVAVSLMLQIAAVSAAPPSGSRGGVTLRVDSRQVVVDNGLVQVSLSRPGG
HITGVRYGGEGTNLLHSTRSRNTGGYWDMVWDIPGSDQRDLLNSLDGSEFRVVTQSDEQV
ELSFRSTYSPERRNGVRLNVDKRLVMLKGSSGFYSYAILEHGADTPAIDITQARLAFKLN
TDRFNYMAVSDDVQRYMPRAADRDAPRSSPLAYKEAVLLVDPAEPQFKGEVDDKYQYTLD
TKDNRVHGWVSTSSGQPSHVGFWVVTPSSEFKSGGPLKRDLTSHVGPTCISMFHGRHYVG
DDIVARIGDGEQWKKVMGPVFVYLNSNSEKGDPRALWEDAKAAAQAEAKKWPYSFPESPD
FNKAGERGSVTGRLLVRDRYVSRENMPARAAYVGLAAPGQLGSWATESKGYQFWTTASNT
SGKFTIDNVRAGEYNLYAWVPGVLGDYMNTTRVTVTPGGAINLGDLVYEAPRSGPTLWEI
GVPDRSAKEMFVPDPDPKYLNKLFQNKDMYRQYGLWERYAQLYPTDDLVYTVGESHHSKD
WYFAHVTRKVGDDIVPTTRQIRFNLDRVLPGGTYTLRVALAAAHAARLQFQVNGATRRVG
GVFGTPAFGDGNAIARHGDHGTQWSLEFPISGRLLREGDNTIHITQTRANSIFLGVMYDY
IRFEGPPGSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacggcgcacctgatcctgctcgccgtcgccgtgtcgttgatgctgcagatc
gccgccgtgtcggcggcgccaccgtcgggatcccgcggcggcgttacgctgcgcgtggat
agtagacaggtcgtggtggacaacgggttggtgcaggtgtcgctgtcgaggcccgggggc
cacatcaccggcgtccgctacggcggggaagggacgaacctgctgcactccaccaggagc
agaaacactggcgggtactgggatatggtgtgggacatccccggctccgatcaacgagac
ttgctcaattcgctggatggctcggagttcagggtggtaacgcagagcgacgagcaggtg
gagctgtcgttccggagcacgtacagcccggaacgtcggaacggcgtccggctcaacgtc
gacaagaggctggtgatgctcaagggcagctccgggttctacagctacgccatcctggag
cacggcgcggacacgccggccatcgacatcacccaggcccggctcgccttcaagctcaac
acggacaggttcaactacatggccgtctcggacgacgtacagcggtacatgccacgggcg
gccgaccgggacgcgccccgcagctccccgctggcgtacaaggaggcggtgctgctggtc
gacccggcggagccgcagttcaagggggaggtggacgacaagtaccagtacacgctggac
accaaggacaaccgggtgcacgggtgggtcagcactagcagcggccagccgagccacgtc
ggcttctgggtcgtcacccccagcagcgagttcaagagcggcgggccgctcaagcgagac
ctcacctcgcatgtcggcccgacgtgcatcagcatgttccacgggaggcactacgtcggg
gacgacattgtggcgcgcatcggggacggcgagcagtggaagaaggtcatgggccccgtg
ttcgtctacctcaactctaactcggagaagggagacccgcgggcgctctgggaggacgcc
aaggcggccgcccaggctgaggcgaagaagtggccctacagcttcccggagtcgccggac
ttcaacaaggccggcgagagaggctccgtcaccggccgacttctcgtaagggacaggtac
gtgagcagggagaacatgcctgctcgggcagcttacgttggcctggccgcgcccgggcag
cttggctcgtgggcgacggagagcaagggctaccagttctggacgacggcgtcgaacact
tccggcaagttcaccattgacaacgttcgggcaggggagtacaacctctacgcgtgggtt
cctggggttctcggcgattacatgaacaccacccgcgtcaccgtaacacccggcggtgca
atcaacctcggcgatcttgtgtacgaggccccgagatcggggccgacgctgtgggagatc
ggcgtccctgaccggagcgcgaaggagatgttcgtccccgaccccgacccgaagtacctc
aacaagctcttccagaacaaagacatgtacagacagtacgggctgtgggagaggtacgcc
caactgtacccgacggacgatctcgtctacaccgtcggcgaaagccatcactccaaggac
tggtacttcgcccatgtcacaagaaaggtcggcgacgacatcgtgccgacgacgcggcag
atccggttcaacctggaccgcgtcctgcccggcggcacctataccttgcgcgtcgccctc
gcggccgctcacgcggcgaggctgcagttccaggtgaacggggcgacgaggcgcgtgggt
ggggtcttcgggacgccggcgttcggcgacggcaacgcgatcgcgaggcacggcgaccac
ggcacgcagtggagcttggagttcccgatcagcgggaggctgctccgggaaggcgacaac
accatccacatcacgcagacgagggcgaacagcatattcttaggggtcatgtacgactac
atacggtttgaaggacctcccggttcttcctag
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