Aegilops tauschii (wheat D): 109773420
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Entry
109773420 CDS
T04345
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109773420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109773420
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109773420
mRNA degradation factors
5'-3' decay
Decapping complex
109773420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
109773420
NCBI-ProteinID:
XP_020187700
UniProt:
A0A452ZIS7
LinkDB
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Position
1
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AA seq
814 aa
AA seq
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MRGLRADAGGSGGGSSSSASTAESSRFDSGQYSFFGKAPLEGLELGGSMADDVGLDSGYG
GGFGGHDDGAYQLSPVGEEIDCMSNLSEIDDLASTFAKLNRSIGGTRNPGVIGDRRSISR
ESSLTTDWAQEAEFSNWVDHDILDSDEFQDSKQLCPQPQYLPQFGESKPLSRTSSYPLEP
LQHRSSEPILGHRSPSFTSYPPPGGGGLSYPAQGLTRHSSIPSPGAGYQMGSPSSSLTGS
PYNMTGLPHGLRLGRSMSYTSADLYANNLLQNEWPNQAGSHAFEHLNLQPSLLQQQLSFP
GSSMSSLLFSQQQQQQQRLSLVQPPHHNYLNMQPHLYHHHSPEIIGRFDHIPSVPSPRDK
RSRSGRGKHSIRFSQQQSDTASQNVDTGGTKFRSKYMSSEEIDTILRMQHSGSHSSDPYV
DDYYHQACIAKRSVNSQKKVNFSPASIKDSHSKSRSGGDQHSYLKVDSLGRVSFSSIRRP
RPLLEVDIPASGDGHKSSTRPLEKEPMLAARITVEDGICLLLDVNDIDRVLQSSQAQDSS
FQLRRRRQVLLEGLATSLELVDPFGPNKPGNSSGLAPTDDLIFLRIVSLPKGRKLLARYL
RLLAPGSELTRIVCMAIFRHLRSLFGGLPSDSGAAETTVSLAKTVSSCVHHMELSALSAC
LAAVVCSSQQPPLRPLGSSAGDGAALIIKSVLDRATELLADPHSAANYSRSTRSLWQASF
DAFFGLLTKYCDSKYGSILQRFSMQGSNSMAGPEASKAVSREMPVELLRASLPHTSEEQR
QMLLDFARKSMPVIGYNHSGARGGHSTTSKPVPG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcctccgggcggacgccggcggcagcggcggtggctcatcctcgtcggcctcc
accgcagagagctcgcgcttcgactcggggcagtactccttcttcggcaaggcgccgctg
gaggggctggagctcggcggcagcatggcggatgacgtcggcctggacagcggctatggc
ggcggcttcggtgggcacgatgatggggcataccagctgtctcctgtgggggaagagatt
gattgcatgagtaacttgtctgaaattgatgatcttgcaagcacattcgcaaagttgaac
cgaagtattggtggaacaaggaatcctggtgttattggtgatagacgatcaatttccagg
gaaagttctttgactaccgactgggcccaggaagcagagttctcgaattgggtggatcat
gatatactggacagcgatgaatttcaagacagcaaacaattgtgtccacagccacagtat
ttgcctcagtttggagagtcaaaaccattgagccgaacatcatcctatcccctggagcca
ctacaacaccgctccagtgaacctattctgggacatagatctccttcatttacatcctat
cctccaccaggtggtggtggattatcttatcctgcacaaggtcttacgcggcactcgagc
attccatcacctggtgctggttaccaaatgggttctccaagttcgtcacttactggttct
ccatataacatgactggtctacctcatggactgcggttggggcgaagcatgtcttacact
tctgcagatctatacgcaaacaacttgctgcaaaacgaatggccaaatcaagctggttcg
catgcttttgagcatcttaatctacagcccagtttattgcagcaacaactatcttttccg
ggcagttcaatgtcttctttgctattttctcagcagcaacagcagcagcagaggttgtca
ctagttcaaccgcctcatcacaattacctaaacatgcagcctcacttgtatcaccatcat
tccccagagataataggcaggtttgatcatattcctagtgtgccttcaccaagggacaag
agatcaaggtcaggaagaggaaaacacagtatacgcttttctcaacaacaatctgataca
gctagccagaatgttgacactggaggaacaaaattcagatcaaagtatatgtcatccgaa
gagattgatactattttaagaatgcagcactctggcagtcacagcagtgatccttacgtc
gatgactactaccaccaagcttgtatagccaaaagatctgtcaattctcagaagaaggtg
aatttctcccccgcgtcaataaaagactcccactcaaagtctaggtctggtggtgatcag
cattcatacctgaaggttgattctcttggaagagtgtcattctcttccatacgtaggcct
cgccctcttcttgaagttgatattcctgcatctggtgatggtcacaagtcatctacgagg
ccactggagaaagagccaatgctggcagccagaattaccgttgaggatggtatatgtctt
cttctagatgtaaatgatattgaccgtgtgttacagtctagccaggcacaggacagcagc
ttccaactgaggcgaaggcggcaggtcctccttgaaggcttagctacatcacttgagctt
gtcgacccttttggccccaacaaacctggcaattcatctggattggccccgacggatgac
cttatttttctccgcattgtttctctccctaaaggacgcaagctcttggcacggtatctc
cgacttcttgcccctggaagtgagctgacccgcatagtttgcatggctatctttcggcat
cttaggagcttgtttgggggtttgccgtcagattctggtgctgcagaaacaacagttagt
cttgccaagaccgtgtcctcctgcgtgcatcacatggagctcagtgcccttagcgcctgc
ctcgccgctgttgtctgctcatcgcaacagccacctctccgccctcttggcagctcagct
ggtgatggtgctgctctaatcatcaaatcagtactggacagagcaactgagctactggcc
gacccccattctgcagccaactacagcaggtcaacccgttcgctttggcaggcgtcgttc
gatgccttctttgggcttctgacgaaatactgcgacagcaagtacgggagcattctgcag
aggttcagcatgcagggatccaactcaatggctggacctgaagcctcgaaagccgtcagc
agggagatgcccgtcgagctactgcgtgcaagccttccgcacaccagcgaagaacaacgc
cagatgcttcttgactttgctcggaaatccatgcccgtgatcggctacaaccactccggc
gctaggggcgggcattctactacttccaaacctgttcccggttaa
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