Aegilops tauschii (wheat D): 109773573
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Entry
109773573 CDS
T04345
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ats
Aegilops tauschii (wheat D)
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ats03036
]
109773573
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ats00535
]
109773573
Chromosome and associated proteins [BR:
ats03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109773573
Meiosis-specific proteins
Cohesin complex and associated proteins
109773573
Proteoglycans [BR:
ats00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109773573
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
109773573
NCBI-ProteinID:
XP_040255668
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All DBs
Position
2:complement(565947977..565956970)
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AA seq
1215 aa
AA seq
DB search
MYIKKVVIQGFKSYREETSTDPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRCED
RRGALLHEGAGHSVISAFVEILFDNSDNRIPVDREEVRLRRTVSSKKDEYYLDGKHVSKT
EVMNLLESAGFSRSNPYYIVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIL
QETAHKRKQIGQTVHYLEERLRELDEEKEELEKYQELDKERRSLEYNLLDHELNDTKNEL
VSMDDDRIFFSEMLSNADDEVADVREKVKSFDKEIEVCTEGIDEIKSQKEDAEKKRTKAL
KLVTQIELDLRDIEDRISNEKRAKDEAAKDLHSMRKESERSKSELAEISNAHQAKLQEEE
EMSKSITDREKQLGVLYQKQGRATQFKNEAARDKWLRKEIHDLERVLSSNRKQESLLQEE
IQKLKDEINNLMNYIESRRSESGKLESALANRQKDYNDFVQQKDALQDERKSLWKQENSV
TAEIDRLKEDLVKACKSLDYATPRDTRRGLNYVDKIVREHKKRGVFGPVLELIDCEEKFF
TAVEVAAGNSLLHVVVENDDISTEIIKIWTKQKDGRVTFIPLNRVYAPSVNIPQSSDFVP
LLKKLKYRADHRPAFELIFGRTVICRDLETATRVARSNDLDCITLDGDQVSSDGGMTGGF
FDYRRSRLKYVKIIRDNKITIEEKTAHLKNVGKELHDIDRKIMDLVTKHQQVDAERDHAK
SELEQFKDDITRAMKQKGLLEKALGKKEKSLDNIRNQIEQIQSGIATKNNEMGTELIDQL
TSEERDLLSRLNPEIAALKEKFLLCKNNRIEIETRKEELETNLSANLTRRQEELEAIISS
ADSEALPLEVKSKEQHLKQSKSNLDELTALLQANVDAINDFMGKMEQLKKQRDDLKLTYT
ARLFFGVVQANLGQTVQDAANDLEQLMNRRRMHLAKQAECMKKMRDLGSLPADAFEKYNG
KDRLLLQKLLHDRNEQLKQFSHVNQKALDQYVNFNEQRDQLRRRRDELALGDKKIRDLIS
LLDQKKDESIERTFKGVGRHFREVFSELVQCGHGALVMMKKKDGDAEDDDNDEDGPREAD
PKGRIDKYVGVKVKVSFTGKGDTQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEID
AALDSQYRTAVGNVVRRLADMADTQFIATTFRPEILKVADKIYGVAHKSRVSYIDVVSKE
QALDFIEQDQAQNAS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagaaggtcgtgatccaagggtttaagagctacagggaggagacctcgaca
gaccctttcagccccaaagttaacgtagttgttggcgcaaatggatctggcaaatcgaac
tttttccacgctatacgctttgtcctaagcgacatgtttcagaacctgcgctgtgaggat
aggcggggagctcttctccatgaaggtgctggacactcggttatatctgcctttgttgag
atactgtttgataattcagacaaccgtattccagttgatagagaagaggtacggctccgg
aggacggtttcttcaaagaaggatgaatactaccttgatgggaaacatgttagtaaaact
gaagtcatgaacctgctggagagtgctggcttctctcgttctaatccatactatattgtc
cagcagggaaagattgcatcccttactctaatgaaggattctgaacgactggatcttctc
aaagagattggtggtacgcgtgtttacgaagataggcgtcgggagagcttgaaaatattg
caagaaacagcccataaaaggaagcagattggtcaaactgtccactacctggaggaaaga
ttgagagaacttgatgaagagaaagaagagctagagaagtaccaggagctggacaaagaa
agaagatcgcttgagtataatctgttggaccatgaactgaatgatactaaaaatgaatta
gtttcaatggatgatgatcgaatttttttttctgaaatgttgtctaatgcggatgatgaa
gtggcagatgtacgtgagaaggtcaagagttttgataaagaaatagaagtctgtacagaa
gggatagatgaaatcaagtctcaaaaggaagatgccgagaagaagcgtactaaagcacta
aagctagtcactcagattgaactggatctgagagatatagaagacagaatttcaaatgaa
aaacgagcaaaggatgaagctgcgaaggatttacacagtatgaggaaagagagtgaaagg
tcaaagtctgaattggccgaaatcagtaatgcgcaccaggccaaattgcaggaagaggag
gagatgtcaaaaagcataacggaccgcgagaagcagcttggcgtattgtaccaaaaacag
gggagggcaactcagtttaagaatgaggctgccagagataagtggcttcggaaagaaatt
catgatcttgagcgtgtactttcatcgaatagaaagcaggaaagcttactccaagaagaa
attcagaaactcaaagatgaaattaataacttgatgaactacatcgagtctcggagaagt
gaatccggcaagttagagtctgctcttgcaaacagacaaaaggactataatgactttgtg
cagcagaaagatgcacttcaagatgaaaggaaatcattgtggaagcaggaaaatagcgta
acagctgaaatcgatcggctaaaggaagatcttgtgaaggcatgcaagagtctggactat
gccacacccagggataccaggagaggcctgaattatgttgacaaaatagtcagggaacat
aaaaagcgcggagtttttggtccagtattagaactaattgactgcgaggagaagtttttt
acagctgttgaggtcgctgctggaaatagcttgctccatgtggtggttgaaaatgacgac
atatcaacggagataattaagatatggacaaaacaaaaagatggacgggtgactttcata
ccactgaacagagtgtacgctcctagcgtcaatattccacaaagttctgattttgttcca
ctgttgaagaagttaaagtaccgcgccgatcatcgccctgcttttgaactgatttttggt
aggacagttatatgccgggacctggaaactgcgaccagggttgcacgcagcaatgatcta
gattgcatcacacttgatggtgatcaagtttcaagtgacggtggtatgacaggaggtttc
tttgactataggcgctcaagattgaagtatgtaaaaataattagggacaataaaataaca
atcgaggaaaagacggcacatctaaagaatgtggggaaagagctacacgatatagataga
aaaattatggatttagttaccaaacatcaacaagtggatgcggaacgtgatcatgccaag
tcagagttggaacagtttaaggatgatattaccagggcaatgaagcaaaaaggattactt
gagaaagcccttggaaagaaggagaaatcactcgacaacatccgcaaccaaattgagcaa
atccaatctggcattgcaacgaaaaataatgagatgggaacagaactgattgaccagcta
acatcagaagaaagagatctcctttcgcggttgaatcctgaaattgctgcattgaaggag
aagtttctcttgtgtaaaaacaatcgcattgagattgaaacaagaaaagaagaactggag
accaatttatcagctaatctgacgaggcgccaggaagagctggaagcgataatttcatct
gcagattctgaagccttgcctcttgaagtcaaatcaaaagagcaacatctgaaacagtcg
aagagcaatcttgatgagttgactgcacttctgcaggctaatgttgatgcaattaatgac
tttatgggaaagatggagcaactgaaaaaacaaagggatgatctgaagctaacttataca
gcaagactgtttttcggggtggttcaagctaatttggggcagactgtgcaagatgcagcg
aacgacttggaacagttgatgaacagaaggagaatgcatctggccaagcaagcagagtgt
atgaaaaagatgcgagatttgggctcgttgcctgctgatgcttttgaaaaatacaatgga
aaagataggctgctgctgcagaagctgcttcatgaccgcaatgagcagttgaagcaattt
agtcatgtcaaccaaaaggctcttgaccagtatgtgaacttcaatgaacaacgcgatcaa
ctgcggagaagacgggatgaacttgcccttggtgacaagaaaattcgagacttgatatcg
cttttagaccaaaaaaaggatgaatcgatcgaacgcacgtttaaaggagttggaaggcac
ttccgcgaagtgttctctgaattagtgcaatgtggccatggagccttggttatgatgaag
aaaaaggatggtgatgctgaagacgatgacaatgatgaggacgggcctcgtgaagcagat
cctaaagggagaatcgacaaatacgttggcgtgaaagtcaaggtttccttcactggcaag
ggagacactcagtccatgaaacagttgtccgggggacagaagacagtggtggcattgaca
ctgatctttgccatccaacgatgtgatccggctccgttctacctcttcgacgagatcgac
gccgctctggattctcagtacagaacagccgtcggcaacgtggtgcgacgtctggctgac
atggcggacacccagttcatcgcaaccacattcaggccagagattctgaaagtcgcggat
aagatctacggcgtggcgcacaagagtagagtgagctacatcgacgtggtgtcaaaggag
caagcgctggacttcattgagcaggaccaggcgcaaaatgccagctga
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