KEGG   Aegilops tauschii (wheat D): 109773768
Entry
109773768         CDS       T04345                                 
Name
(RefSeq) histone deacetylase 6
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03082  ATP-dependent chromatin remodeling
ats03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109773768
   03083 Polycomb repressive complex
    109773768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ats03036]
    109773768
Enzymes [BR:ats01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     109773768
Chromosome and associated proteins [BR:ats03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     109773768
   HDAC complexes
    Sin3A-HDAC complex
     109773768
    BRAF-HDAC complex
     109773768
    REST complex
     109773768
    SHIP complex
     109773768
    MiDAC complex
     109773768
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109773768
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109773768
  Chromatin remodeling factors
   NuRD complex
    109773768
SSDB
Motif
Pfam: Hist_deacetyl Hanta_nucleocap
Other DBs
NCBI-GeneID: 109773768
NCBI-ProteinID: XP_020188071
LinkDB
Position
6:178896478..178900273
AA seq 458 aa
MAASGEGASLPSPAGGEDSRRRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVIHYGL
HRLLELSRPFPASEADISRFHSDEYVSFLASATGNPTILDPRAVKRFNVGEDCPVFDGLF
PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH
RRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAGEGKHYAVNVP
LSDGIDDDTFRDLFQCIIKRVMEVYQPEVVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
LRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQP
RIVENLNTTKDLENIKNMILDHLSKLEHVPNAQFHERPSDPEGPEEKEEDMDKRPAQRSR
LWSGGAYDSDTEDPDNMKTEANDLSANSIMKDASNDDL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcggcgtccggcgagggagcgtcgctgccgtctccggcaggtggcgaggacagccgc
cgccgtcgtgtgagctacttctacgagcccacgatcggcgactactactacgggcagggc
cacccgatgaagccccaccgcatccgcatggcgcactcgctagttatccactatggtctg
caccgcctgctcgagctctcacgccccttccctgcctcggaagccgacatcagccgcttc
cactccgacgaatatgtctccttccttgcctccgcgaccggcaacccgaccatcctcgac
ccccgcgccgtcaagcgcttcaacgtcggggaggactgccccgtctttgacggactcttc
cccttctgccaggcctccgccggtggcagcatcggcgccgccgtcaagctcaaccgtggc
gacgccgacatcaccgtgaactgggctggcgggctccaccacgccaagaagggcgaggcc
tctgggttctgctatgtcaatgacatcgtcctcgccattcttgagcttctcaagttccac
aggcgtgtgctatatgtagacattgatgttcaccacggagatggtgtggaggaggccttc
ttcactacaaaccgagtcatgacggtttctttccacaagtatggagacttctttcctgga
actggacatataactgatgttggagcgggtgaagggaaacattatgctgtaaatgtcccc
ctgagtgatggcattgatgatgacaccttccgtgatctgttccaatgcatcattaaaaga
gtaatggaggtttatcagccagaggtagttgttctccagtgtggggctgactctttggct
ggagataggttaggctgcttcaatctgtctgtgaaaggccacgcagactgcctccgtttt
ctcaggtcattcaatattcctatgatggttttgggaggtggaggttacaccatcagaaat
gttgctcgctgttggtgctatgagactgcagttgctgttggcgttgaacctgataacaag
ttgccttataatgactactacgagtactttggccctgactataatcttcatattcaacca
agaatcgtggaaaatctgaatactacaaaagacttggagaatataaagaacatgatattg
gatcatctttcaaagttagaacatgtcccgaacgctcaattccatgaaagaccatcagat
cctgaaggtccagaagagaaggaggaggatatggacaagagaccagctcagcgcagcaga
ttgtggagtggaggagcttatgattctgacacagaagatcctgacaacatgaaaaccgag
gctaacgacttatctgccaactctatcatgaaggatgcatcaaatgatgatttgtag

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