KEGG   Aegilops tauschii (wheat D): 109774601
Entry
109774601         CDS       T04345                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
ats  Aegilops tauschii (wheat D)
Pathway
ats03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ats00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109774601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ats03019]
    109774601
Messenger RNA biogenesis [BR:ats03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109774601
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     109774601
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4 CHASE5
Other DBs
NCBI-GeneID: 109774601
NCBI-ProteinID: XP_020188936
LinkDB
Position
5:456801384..456804157
AA seq 200 aa
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcggccacggcgatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaagcgcacggagccgtgcctcagccgggg
agcatcgtcattgcccgtgtgactaaggttatggctaggatggcttctgcagatataatg
tgtgttgactcaaaggctgtcaaggaaaagttcactggcatgataaggcagcaagatgtt
cgtgcaactgagattgacaaggtggatatgtaccagtcctatcgacctggcgacattgtc
agagctctggttctctctcttggtgatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagctggtggtacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaattgagcaaaggaaagttgcaaaggtggaa
tag

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