Aegilops tauschii (wheat D): 109774601
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Entry
109774601 CDS
T04345
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109774601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ats03019
]
109774601
Messenger RNA biogenesis [BR:
ats03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109774601
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109774601
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
CHASE5
Motif
Other DBs
NCBI-GeneID:
109774601
NCBI-ProteinID:
XP_020188936
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All DBs
Position
5:456801384..456804157
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AA seq
200 aa
AA seq
DB search
MAATAMEHDGGAEVVVTPGELLGPSSSLEAGRGAYADGRSVRASVTGRRRFVAPAPGSSD
QRSTVEVVGHKAHGAVPQPGSIVIARVTKVMARMASADIMCVDSKAVKEKFTGMIRQQDV
RATEIDKVDMYQSYRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGGTLVPTSW
TEMQCELTGQIEQRKVAKVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggcgatggagcacgacggcggcgccgaggtggtggtcaccccgggggag
ctcctcgggccctcctcgtccctcgaggccgggcgcggcgcctacgccgacggccgctcc
gtgcgcgcgtcggtcaccggccgccgccgcttcgtggcccccgcccccggctcctccgac
cagaggtccacggtggaggtggtcgggcacaaagcgcacggagccgtgcctcagccgggg
agcatcgtcattgcccgtgtgactaaggttatggctaggatggcttctgcagatataatg
tgtgttgactcaaaggctgtcaaggaaaagttcactggcatgataaggcagcaagatgtt
cgtgcaactgagattgacaaggtggatatgtaccagtcctatcgacctggcgacattgtc
agagctctggttctctctcttggtgatgcaagggcatactacctttcgactgccaagaat
gaacttggagttgtttctgcccaaagtatagctggtggtacgctggtcccaaccagttgg
actgagatgcaatgtgaattgactggccaaattgagcaaaggaaagttgcaaaggtggaa
tag
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