Aegilops tauschii (wheat D): 109775246
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Entry
109775246 CDS
T04345
Name
(RefSeq) DNA mismatch repair protein MSH3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109775246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ats03400
]
109775246
DNA repair and recombination proteins [BR:
ats03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109775246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
109775246
NCBI-ProteinID:
XP_020189582
LinkDB
All DBs
Position
2:453858220..453864839
Genome browser
AA seq
1103 aa
AA seq
DB search
MAKQPKQQVLSRFFSPKPPPPTSTAAAAAQPVAPPPPPKPSVSTVASFSPAKRARALSRS
PKTAAKRPRPSPSPVSVTPPRGAAVRRALLEPPPPGSNPSGGDGGGGRGYTPLEQQVVDL
KARHPDVLLMVEVGYRFRFFGEDAAVAASVLGIVAHPDRSFLTASVPTFRLGFHVRRLVD
AGHKVGVVRQTETAAIKAAAAARGGGGAAPFARELSAVYTRATIEAGAGEMEGGGAPEEG
SRYLVCVVDKEVDAVGREGFEVKVGVVAIEVSTGEVVHGEFMDGAARSGLEAVLLGLAPV
EVILGTPLSFSTEKLMRAYAGPASNVRVECTSRNCFSEGGALAELMSLFEKSEVNSPTIE
NDKQMMEINEEDNNLRGMEGVMAMPELVAQAMALSVHYLKGFGMERLICFGSSFRPFTAN
TEMSLSANALQQLEVLKNNSDGSIEGSLFQTMNNTCTAFGSRLFRHWLTHPLCDRNLICA
RHDAISEISESMGSRQDSVSIRQDEGDGCCAASARSDLSTILSSVLTMLGRSLDSQRGIT
RIFHCKATAKEFVGVIQAVLTAGKELRKLVLEDTDNVSSQHRTVHSSLLRRLISTASSSA
VLANAVKLLSCLDKDAADQGDMINLFISSVDQFPEVAEGHVTVQMAKQKLDLLIVEYRKQ
LGMRSLEYKTVSGTAYLIELPVDRRVPSNWMKVNSTKKTIRYHTPEVLKNLDNLLLAKEE
LAVICRKTWHKFLMDFGKYYAQFQASVESLAALDCLYSLATLAKQNNYVQPNFVPENEAS
QIHIKDGRHPVLESLLGDNFVPNDTDLHADGQYCQIVTGPNMGGKSCYIRQVALITIMAQ
VGSFVPASSAILHVVDGIYTRMGASDSIQQGTSTFYEEMNEASNILQNCSSRSLVIIDEL
GRGTSTHDGVAIAYATLHYLLKNKKCIVIFVTHYPKILDIQSEFEGSVGAYHVSYLSTRK
LLQISDEKMGISTETEDLGEITFLYKLVAGASDRSFGLNVALLAQLPLRCIKRASVMAAK
LQEEMSKRDENKLLRLMDEPSRDGPWESSPEVGLLCAEPHQGLMEACRRILRDMRSAQSN
NDVTNTLSCLKSAQEIASKMIKG
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagccgaagcagcaggtactctcccgcttcttctcccccaagcccccacca
ccgacctccaccgccgccgccgccgcccaacccgtcgcgcctcctcctcccccgaaaccc
tccgtctccaccgtcgcctccttctcccccgccaagcgcgcgcgtgccctctcccgctcc
cccaaaaccgccgccaaaaggccccgaccctccccctcccccgtctccgtcaccccccct
cgcggagccgccgtccgccgcgcgctcctcgagccgccgccccccgggtcgaaccctagc
ggcggcgatggcggcggcggcaggggctacaccccgctggagcagcaggtcgtggacctc
aaggcccgccacccggacgtcctcctcatggtcgaggtgggctaccgcttccgcttcttc
ggcgaggacgccgccgtcgccgcctccgtcctcggcatcgtcgcccaccccgaccgcagc
ttcctcaccgccagcgtccccacgttccgcctgggcttccacgtccgccgcctcgtcgac
gcgggccacaaggtcggcgtcgtccgccagaccgagaccgcggcgatcaaggcggcggcg
gccgcgcgcggcgggggcggcgcggctcccttcgcgcgcgagctgtcggcggtgtacacg
cgcgccaccatcgaggccggggctggggaaatggagggcggcggcgcgccggaagagggg
agcaggtacctcgtctgcgtggtggacaaggaggtggatgccgtggggagggaggggttc
gaggtgaaggttggggtggtggccatcgaggtgtccaccggcgaggtcgtgcacggggag
ttcatggacggcgcagccaggagcgggcttgaggccgtgctgcttggcctggcgcccgtt
gaggtcatactcggcacccctctctcgttctctactgaaaagctgatgagggcatatgcg
ggacctgcctctaatgtccgggttgagtgcacttcgcgtaattgtttcagcgagggcggc
gctttagcagaactgatgtctttgtttgagaaatcggaggtcaattcaccaaccattgaa
aacgataaacagatgatggaaataaatgaagaggacaacaatcttcgtgggatggagggt
gtcatggctatgccagagctagttgcccaagcaatggcattgagcgttcactatttgaag
ggttttggtatggagaggttaatctgctttggttcttcattccggccatttactgctaat
actgaaatgtctctatcagcaaacgctcttcagcagctcgaggtattaaagaacaactca
gatggttcaatagaagggtccctgttccaaactatgaacaacacatgtacagcttttgga
tctaggctgtttagacactggttgactcaccccttatgtgatagaaatctaatatgtgct
cgtcacgatgcaatctctgagatctctgaatcgatgggatcacggcaagattcagttagc
attcgacaggatgaaggggatgggtgctgcgcagcttctgcgcgaagtgatctcagcacc
attctttcatctgttttaacaatgctgggaagatcacttgattctcaaagaggaattaca
agaatttttcactgcaaagccacagctaaagagtttgttggggtcatccaggctgtcttg
acggctggaaaggaactgcggaagcttgttctcgaggatactgacaacgtgtcttctcag
catagaactgtccactcttctttgttgagaaggctcataagtacagcttcatcatctgct
gtacttgccaatgctgtgaaacttctgtcgtgtcttgacaaagatgctgctgatcaagga
gatatgataaacttattcatttcatctgttgaccagttccccgaggttgcagagggtcat
gtgactgttcaaatggccaaacaaaaactggatttattaattgttgaatatcggaagcag
cttggcatgcgcagcttggagtacaaaaccgtatctggaacagcttacctgatcgaacta
ccagtagatagaagggtgccttcaaattggatgaaagtaaatagcaccaaaaaaactatt
agataccacactcctgaagtattgaagaacttggacaacttattactggctaaagaagaa
ctagcagttatctgcaggaaaacatggcacaaattccttatggatttcggcaaatattat
gcgcagtttcaagcatctgtcgaatctcttgcagctcttgactgcttatactctcttgcc
actcttgcaaaacaaaataattatgtacaacctaattttgttcctgaaaatgaagcaagt
cagatccacatcaaagatggccgccatccggttctggagtctctacttggagacaatttc
gttccaaatgacacagaccttcatgcagatgggcagtactgccagattgttacaggacca
aacatgggaggaaaaagttgctatattcgccaagttgcactaattaccattatggcccag
gttggttcctttgtaccagcttcatcagcaatacttcatgttgttgatggaatttatact
cggatgggtgcatctgacagtattcaacaaggaacaagtaccttttatgaagagatgaat
gaagcttccaacatattacagaactgctcatctcgatccctagttatcattgatgagctt
ggccgtggaacaagcacacacgatggtgttgctatagcctatgctacattacactatctc
ctgaaaaacaagaaatgtattgtcatttttgtaactcactatccaaagattcttgatatc
cagagtgaatttgaaggttctgttggggcataccatgtttcatatctgtcgacaaggaag
ctgttgcaaatcagtgatgaaaagatgggtattagcacagaaacagaggatcttggagaa
attactttcttgtataaacttgttgctggagcttcagacagaagctttggtcttaatgtc
gcactgcttgcgcagctcccgttgagatgtattaagcgggcatcggtcatggcagccaaa
ctgcaagaagagatgagtaagcgcgatgaaaacaagctgctgaggttaatggacgaacca
tccagggatggaccatgggaaagctctccagaagttggtttgctttgtgcagagcctcac
caggggttgatggaagcatgccgcaggatactgcgtgacatgagatctgctcaaagcaat
aacgacgtaacaaatacactttcttgtttgaagagtgcacaggagattgcatcgaagatg
attaaagggtag
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