Aegilops tauschii (wheat D): 109776680
Help
Entry
109776680 CDS
T04345
Name
(RefSeq) uncharacterized protein isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ats
Aegilops tauschii (wheat D)
Pathway
ats03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ats00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109776680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ats03041
]
109776680
03009 Ribosome biogenesis [BR:
ats03009
]
109776680
Enzymes [BR:
ats01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109776680
Spliceosome [BR:
ats03041
]
Complex A
U1 snRNP components
U1 related factors
109776680
Complex B
109776680
Ribosome biogenesis [BR:
ats03009
]
Eukaryotic type
Pre-60S particles
Helicases
109776680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
109776680
NCBI-ProteinID:
XP_020190933
UniProt:
A0A453E4D7
LinkDB
All DBs
Position
3:complement(56355137..56362832)
Genome browser
AA seq
1345 aa
AA seq
DB search
MAGAEAAADSSGPRFAPDDPTLPAPWKALIDGETLYYWNPETNLTQYDKPGAAAPPLPAA
ASTPAPGAFAQPGMQQQQPPQQPQQTAQRPPFQYQGQQAQQPPFQYQGQQAQQPPFQYQQ
QQEQMPNQQGSQQPLAPQYPNAHQQPMPYQHGHYMQPQQQYSYQVGQQPQMPQTQYNQGQ
QMPIPQAANQGQQPTMPQGAYNQGQRPPMPQAAYSHGQRPPMPQSAYNQGQQPQMPHASY
NQGQQLQGTRMPQTQVQHTQQSPGFHQPAQASQGLQASQPQVPQMSPQQGQLQHGFQFTP
QQGKQPHHGHLVSQHGQQNTTVKVDAGAHHEGKQTGFSLQLSQQHGQVPLSNQTLPSSHQ
RPEAHNQLNIHGVGGPPYPAKHHLGGSSPGETNNVSFLSAPAQTHQGGVDTNYRQQLASS
HVVPNHIAPSPGRPPIGFKRGNSEDQFEKNEALSSGRFDGINALHQQPKPAALPPPQNHL
DMRNGPPYSQPDNFGGYNMAPPHLVQNPLNNGPFPIGALARPPSGTFSPPDFPSVASVDA
YRQHHEVTAVGENVPPPFMTFEATGFPPEILSEVHAAGFLNPTPIQAQTWPVALQSRDIV
AIAKTGSGKTLGYLIPAFVHLRRCQNNPMSGPTVLVLAPTRELASQIQDEAIKFGRSSRV
SCTCLYGGAPKGPQLRELERGADIVVATPGRLNDILEMRKISLHQISLLVLDEADRMLDM
GFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLRNPVQINIGSIDELVANKSITQ
YVEMVPPMDKQRRLEQILRAEERGSKIIIFCSTKKMCDQLARSIGRSFGAASIHGDKSQG
ERDHILGQFRTGIVPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGAT
GVAYTFFSEQDWKYAADLVKVLDGTGQQVPPELQQMAARGASGAPRNQAGGMSRWDSPGG
GTRFESAVGGPGGYGGIREGPGGYGGIREGPGGFGGRDGPGGFIDRDGPGRFGDRDGPGR
FGGRETPDGFGGRDGPGCFDGRMGPGPGGFGGREGPGGFGGREGPGPSGFSGRGGRGSDG
FGRRGGASPGRFGGHGGRGDSPGFGGRGRGDSSGFGGRGRGDFSGGRGGRGRGFGGRGRS
DRGPHDRFISDGRGRYDGRRGFDKGQGRSYSRSPDRSRSRGYDRRSDSRSLSSRSRSRSR
SWSRSRSRSRSWSRSRSRSRSRSRSRDQGPVERRPRVRSGFDVLPPATEAGAAVTGPLPV
PLPGSVSDVAAPIPRQSLADASDMSPMSPGGLVHVQEGAPFMGGNDANISSRQADQPSQA
TDLTIPPSFSAAANFPGPAVQQDAP
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcagaggctgccgcggattcatcgggcccgcgattcgcccctgacgacccg
acgctcccagcgccttggaaagcattaatcgacggcgagacgctctactactggaaccct
gagaccaacctcactcagtatgacaagccgggtgcagctgcgcctcccttgcccgcggct
gcgtccacgccagcgcccggggcttttgcgcagcctggcatgcagcagcaacagcccccg
cagcagccgcaacagacggcacagcgaccgccgtttcagtatcaaggtcagcaagcacag
caaccgccgtttcagtatcaaggtcagcaagcacagcaaccgccgtttcagtatcaacag
cagcaagaacagatgccgaaccagcaagggtcacaacagccactagctcctcagtaccca
aatgctcatcagcagccaatgccatatcagcacggtcattatatgcaaccccagcagcaa
tattcatatcaggtaggccagcagccacaaatgccgcaaactcagtataatcaaggccag
cagatgccaatcccgcaagctgccaatcaaggtcagcagccaacgatgccacaaggagct
tataatcaaggtcagcgtccaccgatgccgcaagctgcctacagtcatggccagcgcccc
cctatgccacaatctgcctacaatcaaggccagcagccacaaatgccgcatgcttcttac
aatcaaggtcagcagttgcagggaacaaggatgcctcagactcaagtgcaacacacacaa
caatcaccaggctttcatcaacctgcccaggcttcacaaggcttgcaagcttcacagcct
caagtacctcaaatgtccccccaacagggccaactccagcatggcttccagttcacccct
caacagggaaaacaaccacatcatggtcatcttgtctcccaacatgggcaacaaaatacc
acggtgaaggttgatgcaggagctcatcatgaaggaaagcagactggcttttccttacag
cttagtcagcagcatggccaagttcctctttcaaaccagacgttgccttcaagtcatcaa
cgtcctgaagcccataatcaactaaatattcatggagtcggagggccaccatatcctgca
aagcatcatcttggtggatcatccccaggtgaaactaataacgttagtttcttgagcgcg
cctgctcaaacacatcaaggcggagtggatactaactaccggcaacaactggctagtagc
catgtagttcccaatcatattgctccttcaccgggtcgacctccaataggtttcaagagg
ggcaatagtgaagatcaatttgaaaaaaatgaggctctctcctctgggaggtttgatgga
ataaatgctctccatcagcagccaaaacctgccgctcttccacccccacaaaatcacctg
gatatgaggaatggcccaccttattcccagccagataattttgggggttataacatggca
cctccacatttggtacaaaacccacttaacaatggtccatttcctatcggagctttagcg
aggccaccatccggaacattttctcctcctgatttcccaagtgtcgcttcagtagatgca
tatcgtcaacaccatgaagtaactgcagtgggtgagaatgttcctcctccatttatgaca
tttgaggctactggattccccccagagatcctgagcgaggttcatgctgctggcttctta
aaccccaccccaattcaggctcaaacatggcctgttgcacttcaaagcagggacatagta
gctattgccaagacgggatcagggaagacactggggtaccttattcctgcttttgtacat
ctgaggagatgccaaaacaatccaatgtcgggccctacagtgttggttttggcccctact
cgtgagcttgcttcacaaatacaagatgaagcaattaagtttggtcgatcatctagagta
tcatgcacatgcctgtatggtggagctccaaagggacctcagctcagagaacttgagcgt
ggagcagatattgtggtagctacacctggacgactcaatgatatcctggaaatgaggaag
attagtctccatcagatttcattacttgtgcttgatgaagctgaccgcatgcttgacatg
ggctttgagccacaaatacggaagattgttgacgagattcctcgtaatagacaaactcta
atgtacactgccacttggccaaaggaggttacaaaaatagctggggatttattgagaaat
cctgtccagatcaatattggtagcattgatgaacttgttgccaacaaatccatcacacag
tatgtagagatggttccacccatggataagcagcgtcgcttggagcagattcttagagcg
gaagaaaggggctcaaagatcatcatattttgctcaaccaagaaaatgtgcgatcagctt
gctcgtagcattggtcgtagttttggtgctgcaagcattcacggcgacaaatcacagggt
gaaagggatcatattctgggtcagtttcggactggtattgtgccagtattagtggccaca
gatgttgctgctcgtggacttgacatcaaagacatcagagtggtgatcaattatgacttc
ccaactgggatcgaagactatgtgcatcgcatagggcgtacaggaagggctggggctact
ggagttgcatacactttcttctctgagcaagattggaaatatgctgctgatttggtgaaa
gtcttggatggtactggtcagcaggtacctccagagctgcaacagatggctgcacggggt
gcatctggtgctccaagaaaccaggctggtggcatgagccgttgggatagtcctggtggt
ggtactcgttttgaatctgctgttggcggccctggtggttatggtggaattagggagggc
cctggtggttatggtggaattagggagggccctggaggctttggtggtcgagatgggcca
ggtggatttattgatcgggatggcccgggcagatttggtgatcgagatggccccggccgc
tttggtggtcgagagactcctgacggctttggtggtcgggatggccctggttgcttcgat
ggacggatgggccctggtcctggtggatttggtggaagggaggggcctggtggatttggt
ggaagggagggtcctggacccagtggcttcagcgggagaggggggcgtgggtctgatggc
tttggcaggagaggtggagcaagccctggtagatttggtggtcacggtggcaggggtgat
tctcctggttttggtggtcgtggtaggggtgattcttctggttttggtggacgaggccgg
ggtgatttctctggtggacgtggtggaagagggcgtggatttggaggacggggacgttct
gaccgaggtccacacgatcgttttatctcagatggacgtggaaggtatgatggccgtcga
ggatttgacaagggtcaaggcaggagctacagccgtagcccagatagaagccgctcgcga
ggctatgacagaagaagtgatagcaggagcctaagtagtaggagcagaagccgtagcaga
agctggtcacgcagcaggagccgcagcaggagttggtcacggagccgcagccgtagtcgc
agcaggagcagaagccgtgatcagggtccagtagaacgcaggccgcgggtaagatctggt
tttgatgtgttgccacctgcaactgaagctggagctgctgtaactgggccacttcctgta
ccactacctggttcagtgtctgatgttgctgcacccatacctagacaatcgctggctgac
gcatctgatatgtcacctatgtcgcctggtggcttggtccatgtccaggagggtgcaccg
ttcatgggtgggaacgatgccaacattagcagcagacaggctgaccagccttcccaagcg
actgatctaacaataccaccaagcttctctgcagctgcaaattttccagggccggcagtt
cagcaggatgccccatga
DBGET
integrated database retrieval system
